Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-3A0A0B4J1K1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-3A0A0B4J1K1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-3A0A0B4J1K1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-3A0A0B4J1K1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-3A0A0B4J1K1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Trav4-3A0A0B4J1K1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-3A0A0B4J1K1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4-3A0A0B4J1K1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Trav4-3A0A0B4J1K1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav4-3A0A0B4J1K1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4-3A0A0B4J1K1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Trav4-3A0A0B4J1K1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Golph3-205ENSMUST00000228671 2842 ntBASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4-3A0A0B4J1K1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4-3A0A0B4J1K1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav4-3A0A0B4J1K1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4-3A0A0B4J1K1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4-3A0A0B4J1K1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4-3A0A0B4J1K1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4-3A0A0B4J1K1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms