Protein–RNA interactions for Protein: A0A0A6YW38

Gm28870, Predicted gene 28870, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28870A0A0A6YW38 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28870A0A0A6YW38 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm28870A0A0A6YW38 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28870A0A0A6YW38 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28870A0A0A6YW38 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Gm28870A0A0A6YW38 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28870A0A0A6YW38 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28870A0A0A6YW38 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28870A0A0A6YW38 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.12■□□□□ 0.33
Gm28870A0A0A6YW38 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28870A0A0A6YW38 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28870A0A0A6YW38 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28870A0A0A6YW38 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28870A0A0A6YW38 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28870A0A0A6YW38 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm28870A0A0A6YW38 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28870A0A0A6YW38 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28870A0A0A6YW38 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm28870A0A0A6YW38 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm28870A0A0A6YW38 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm28870A0A0A6YW38 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28870A0A0A6YW38 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28870A0A0A6YW38 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28870A0A0A6YW38 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28870A0A0A6YW38 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28870A0A0A6YW38 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28870A0A0A6YW38 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Gm28870A0A0A6YW38 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.08■□□□□ 0.33
Gm28870A0A0A6YW38 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28870A0A0A6YW38 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.08■□□□□ 0.32
Gm28870A0A0A6YW38 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm28870A0A0A6YW38 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28870A0A0A6YW38 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28870A0A0A6YW38 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28870A0A0A6YW38 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28870A0A0A6YW38 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Golph3-202ENSMUST00000226517 2359 ntBASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28870A0A0A6YW38 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28870A0A0A6YW38 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28870A0A0A6YW38 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28870A0A0A6YW38 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28870A0A0A6YW38 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28870A0A0A6YW38 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.06■□□□□ 0.32
Gm28870A0A0A6YW38 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28870A0A0A6YW38 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28870A0A0A6YW38 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28870A0A0A6YW38 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28870A0A0A6YW38 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28870A0A0A6YW38 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28870A0A0A6YW38 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28870A0A0A6YW38 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Gm28870A0A0A6YW38 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28870A0A0A6YW38 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28870A0A0A6YW38 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28870A0A0A6YW38 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28870A0A0A6YW38 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm28870A0A0A6YW38 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Gm28870A0A0A6YW38 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28870A0A0A6YW38 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28870A0A0A6YW38 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms