Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.91□□□□□ -0.02
Ighv1-9A0A0A6YW37 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv1-9A0A0A6YW37 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.91□□□□□ -0.02
Ighv1-9A0A0A6YW37 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv1-9A0A0A6YW37 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv1-9A0A0A6YW37 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv1-9A0A0A6YW37 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv1-9A0A0A6YW37 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.91□□□□□ -0.02
Ighv1-9A0A0A6YW37 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Ighv1-9A0A0A6YW37 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Gm7417-201ENSMUST00000192950 473 ntBASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-9A0A0A6YW37 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gm9870-201ENSMUST00000063874 645 ntBASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-9A0A0A6YW37 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Mir6236-201ENSMUST00000184437 123 ntBASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gm5812-201ENSMUST00000061073 957 ntBASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Ighv1-9A0A0A6YW37 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-9A0A0A6YW37 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gm15546-201ENSMUST00000122095 826 ntBASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gm43530-201ENSMUST00000195920 274 ntBASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-9A0A0A6YW37 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-9A0A0A6YW37 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ighv1-9A0A0A6YW37 Golph3-202ENSMUST00000226517 2359 ntBASIC14.85□□□□□ -0.03
Ighv1-9A0A0A6YW37 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-9A0A0A6YW37 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ighv1-9A0A0A6YW37 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-9A0A0A6YW37 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-9A0A0A6YW37 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms