Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav16nA0A075B634 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav16nA0A075B634 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav16nA0A075B634 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav16nA0A075B634 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16nA0A075B634 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16nA0A075B634 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16nA0A075B634 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16nA0A075B634 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav16nA0A075B634 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16nA0A075B634 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16nA0A075B634 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16nA0A075B634 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.94□□□□□ -0.02
Trav16nA0A075B634 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16nA0A075B634 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16nA0A075B634 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16nA0A075B634 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16nA0A075B634 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Gm10420-201ENSMUST00000121713 882 ntBASIC14.91□□□□□ -0.02
Trav16nA0A075B634 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav16nA0A075B634 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav16nA0A075B634 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16nA0A075B634 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16nA0A075B634 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav16nA0A075B634 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16nA0A075B634 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16nA0A075B634 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16nA0A075B634 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.89□□□□□ -0.03
Trav16nA0A075B634 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16nA0A075B634 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms