Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4d-3A0A075B625 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Golph3-205ENSMUST00000228671 2842 ntBASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4d-3A0A075B625 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trav4d-3A0A075B625 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav4d-3A0A075B625 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4d-3A0A075B625 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4d-3A0A075B625 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4d-3A0A075B625 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4d-3A0A075B625 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4d-3A0A075B625 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4d-3A0A075B625 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4d-3A0A075B625 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4d-3A0A075B625 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav4d-3A0A075B625 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav4d-3A0A075B625 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav4d-3A0A075B625 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4d-3A0A075B625 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4d-3A0A075B625 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms