Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gm45728-201ENSMUST00000211475 2979 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gm11619-201ENSMUST00000117474 237 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gm22146-201ENSMUST00000157397 288 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gm6686-201ENSMUST00000178455 258 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gm18182-201ENSMUST00000191380 1251 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gm5311-201ENSMUST00000203518 709 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gm7594-201ENSMUST00000218595 871 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 AC119177.2-201ENSMUST00000226699 629 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gm4604-201ENSMUST00000025040 390 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gm37975-201ENSMUST00000195494 2099 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm38111-201ENSMUST00000194817 2741 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm7357-201ENSMUST00000195361 2991 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm24470-201ENSMUST00000104486 132 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm12628-201ENSMUST00000122193 382 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm16581-201ENSMUST00000160730 991 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm9162-201ENSMUST00000182081 991 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm18463-201ENSMUST00000207258 474 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm18460-201ENSMUST00000208088 464 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm6426-201ENSMUST00000209048 854 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 AC134860.5-201ENSMUST00000225071 1249 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 AC156016.4-201ENSMUST00000227470 647 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 AC154640.1-203ENSMUST00000228316 1618 ntBASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 4930429F24Rik-201ENSMUST00000151676 1520 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 AC110091.2-201ENSMUST00000215107 1512 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim9Q8C7M3 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms