Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Gm12904-201ENSMUST00000117451 1399 ntBASIC13.8□□□□□ -0.2
Cps1Q8C196 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Prpf39-201ENSMUST00000120580 4069 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Cps1Q8C196 Gm10408-201ENSMUST00000096168 1512 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cps1Q8C196 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Cps1Q8C196 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Cps1Q8C196 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Gm37909-201ENSMUST00000193157 2159 ntBASIC13.8□□□□□ -0.2
Cps1Q8C196 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Calcoco2-201ENSMUST00000068686 1621 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Exosc1-201ENSMUST00000075280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Gm25763-201ENSMUST00000104099 129 ntBASIC13.8□□□□□ -0.2
Cps1Q8C196 4933428C19Rik-201ENSMUST00000146043 818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cps1Q8C196 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC13.8□□□□□ -0.2
Cps1Q8C196 Pou1f1-203ENSMUST00000176038 1174 ntTSL 5 BASIC13.8□□□□□ -0.2
Cps1Q8C196 Platr11-201ENSMUST00000182885 388 ntTSL 3 BASIC13.8□□□□□ -0.2
Cps1Q8C196 Gm8391-201ENSMUST00000185632 726 ntBASIC13.8□□□□□ -0.2
Cps1Q8C196 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC13.8□□□□□ -0.2
Cps1Q8C196 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC13.8□□□□□ -0.2
Cps1Q8C196 Tmem147-207ENSMUST00000209065 727 ntTSL 2 BASIC13.8□□□□□ -0.2
Cps1Q8C196 Gm19228-201ENSMUST00000214030 717 ntBASIC13.8□□□□□ -0.2
Cps1Q8C196 AC133598.3-207ENSMUST00000225918 704 ntBASIC13.8□□□□□ -0.2
Cps1Q8C196 Gm26397-201ENSMUST00000083703 134 ntBASIC13.8□□□□□ -0.2
Cps1Q8C196 Gm7125-201ENSMUST00000093430 273 ntBASIC13.8□□□□□ -0.2
Cps1Q8C196 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cps1Q8C196 Gm15550-201ENSMUST00000120824 1748 ntBASIC13.79□□□□□ -0.2
Cps1Q8C196 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Cps1Q8C196 Gm3712-201ENSMUST00000118523 2071 ntBASIC13.79□□□□□ -0.2
Cps1Q8C196 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.79□□□□□ -0.2
Cps1Q8C196 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Scgb1b30-201ENSMUST00000108083 491 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cps1Q8C196 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC13.79□□□□□ -0.2
Cps1Q8C196 Gm15499-201ENSMUST00000141390 422 ntTSL 5 BASIC13.79□□□□□ -0.2
Cps1Q8C196 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC13.79□□□□□ -0.2
Cps1Q8C196 E130114P18Rik-209ENSMUST00000186369 306 ntTSL 5 BASIC13.79□□□□□ -0.2
Cps1Q8C196 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC13.79□□□□□ -0.2
Cps1Q8C196 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC13.79□□□□□ -0.2
Cps1Q8C196 AC154706.1-201ENSMUST00000225482 585 ntBASIC13.79□□□□□ -0.2
Cps1Q8C196 AC158519.1-201ENSMUST00000228615 179 ntBASIC13.79□□□□□ -0.2
Cps1Q8C196 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cps1Q8C196 Ang2-201ENSMUST00000051274 438 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cps1Q8C196 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cps1Q8C196 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cps1Q8C196 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Gm6351-203ENSMUST00000139828 1542 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Cps1Q8C196 BB014433-203ENSMUST00000179941 1543 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cps1Q8C196 Mettl18-201ENSMUST00000045694 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC13.78□□□□□ -0.2
Cps1Q8C196 Gm25953-201ENSMUST00000175338 83 ntBASIC13.78□□□□□ -0.2
Cps1Q8C196 Gm26834-201ENSMUST00000181815 950 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Gm17868-201ENSMUST00000192761 668 ntBASIC13.78□□□□□ -0.2
Cps1Q8C196 Npm1-202ENSMUST00000093201 1192 ntTSL 5 BASIC13.78□□□□□ -0.2
Cps1Q8C196 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.78□□□□□ -0.2
Cps1Q8C196 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Cps1Q8C196 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.78□□□□□ -0.2
Cps1Q8C196 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cps1Q8C196 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cps1Q8C196 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cps1Q8C196 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cps1Q8C196 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cps1Q8C196 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cps1Q8C196 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cps1Q8C196 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cps1Q8C196 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cps1Q8C196 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms