Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Csnk2a1-201ENSMUST00000099224 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 Pcdh1-201ENSMUST00000057185 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 AC138284.4-201ENSMUST00000216704 2882 ntBASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 Scfd2-208ENSMUST00000151474 3834 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 Slc25a44-201ENSMUST00000057935 3577 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 Gm31024-201ENSMUST00000207600 2353 ntBASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 Tsr2-202ENSMUST00000112683 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd1lQ9CXF7 Gm16478-201ENSMUST00000208113 5084 ntBASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Phf21a-208ENSMUST00000111294 3710 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Sms-201ENSMUST00000112529 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Gm7052-201ENSMUST00000167568 1512 ntBASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Gm8737-201ENSMUST00000122208 642 ntBASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Gm27203-201ENSMUST00000183677 307 ntBASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Mcm5-201ENSMUST00000164309 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Gm45170-201ENSMUST00000206746 1671 ntBASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Eif4e2-201ENSMUST00000050876 2869 ntTSL 5 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Pdk4-201ENSMUST00000019721 3484 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Sept6-202ENSMUST00000060474 3457 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Ccnc-202ENSMUST00000102997 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Gm43764-201ENSMUST00000202553 3172 ntBASIC11.67□□□□□ -0.54
Chd1lQ9CXF7 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Acot11-201ENSMUST00000065253 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Cipc-205ENSMUST00000187814 4098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Cipc-201ENSMUST00000038369 4098 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Itga7-201ENSMUST00000099112 4013 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Gm43412-201ENSMUST00000197455 2818 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Pitrm1-207ENSMUST00000222485 3906 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Tia1-202ENSMUST00000095753 4477 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Synj2-207ENSMUST00000115788 3498 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Trpm1-202ENSMUST00000177102 2928 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Gm12165-201ENSMUST00000117047 342 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Gm15573-201ENSMUST00000119487 540 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Gm13019-201ENSMUST00000120000 276 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Gm11980-201ENSMUST00000121445 986 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 AC154683.1-201ENSMUST00000228409 1284 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Zfp469-202ENSMUST00000187142 3082 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Ash2l-203ENSMUST00000110609 2300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Cdca2-205ENSMUST00000150006 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Mmgt1-201ENSMUST00000059899 4234 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Arhgap26-216ENSMUST00000155576 2280 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC11.66□□□□□ -0.54
Chd1lQ9CXF7 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.65□□□□□ -0.54
Chd1lQ9CXF7 4930511J24Rik-201ENSMUST00000223541 1528 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Chd1lQ9CXF7 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd1lQ9CXF7 Rexo5-202ENSMUST00000084644 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms