Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim9Q8C7M3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm20953-201ENSMUST00000216399 2614 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm4865-201ENSMUST00000196284 1309 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm15032-201ENSMUST00000118547 411 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Ak3l2-ps-201ENSMUST00000120282 672 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm14993-201ENSMUST00000121180 164 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm11993-201ENSMUST00000121861 820 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm12035-201ENSMUST00000121890 623 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Mir6366-201ENSMUST00000184472 82 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Gm37976-201ENSMUST00000193827 345 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim9Q8C7M3 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Gm13039-201ENSMUST00000118638 794 ntBASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Gm8194-201ENSMUST00000159783 859 ntBASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Gm43305-202ENSMUST00000225083 705 ntBASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trim9Q8C7M3 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim9Q8C7M3 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trim9Q8C7M3 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trim9Q8C7M3 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trim9Q8C7M3 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC11.46□□□□□ -0.58
Trim9Q8C7M3 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim9Q8C7M3 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim9Q8C7M3 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim9Q8C7M3 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim9Q8C7M3 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trim9Q8C7M3 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim9Q8C7M3 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim9Q8C7M3 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms