Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm5865-201ENSMUST00000198713 637 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm5510-201ENSMUST00000117826 486 ntBASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm15264-201ENSMUST00000118050 502 ntBASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm6441-201ENSMUST00000120983 696 ntBASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm25545-201ENSMUST00000122673 323 ntBASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm13827-201ENSMUST00000148801 372 ntBASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm4870-201ENSMUST00000198525 1251 ntBASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gm6562-201ENSMUST00000221903 464 ntBASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pcdh19Q80TF3 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Gm19972-201ENSMUST00000218180 5664 ntBASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Gm23595-201ENSMUST00000104306 130 ntBASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pcdh19Q80TF3 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms