Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cacna1sQ02789 Gm20642-201ENSMUST00000177185 1512 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cacna1sQ02789 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cacna1sQ02789 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cacna1sQ02789 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Cacna1sQ02789 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cacna1sQ02789 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cacna1sQ02789 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cacna1sQ02789 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cacna1sQ02789 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Kcnip4-206ENSMUST00000175660 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Olfr122-201ENSMUST00000119082 993 ntBASIC13.04□□□□□ -0.32
Cacna1sQ02789 Gm13450-201ENSMUST00000121107 167 ntBASIC13.04□□□□□ -0.32
Cacna1sQ02789 Gm5696-201ENSMUST00000189850 552 ntBASIC13.04□□□□□ -0.32
Cacna1sQ02789 Gm43903-201ENSMUST00000205126 617 ntBASIC13.04□□□□□ -0.32
Cacna1sQ02789 Tmem147-207ENSMUST00000209065 727 ntTSL 2 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Gm37516-201ENSMUST00000192593 1954 ntBASIC13.04□□□□□ -0.32
Cacna1sQ02789 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Phactr1-202ENSMUST00000110161 1950 ntTSL 5 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 AC140209.1-203ENSMUST00000227412 1524 ntBASIC13.04□□□□□ -0.32
Cacna1sQ02789 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Gm9434-201ENSMUST00000118975 813 ntBASIC13.04□□□□□ -0.32
Cacna1sQ02789 Gm8832-201ENSMUST00000119890 395 ntBASIC13.04□□□□□ -0.32
Cacna1sQ02789 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Cfap77-202ENSMUST00000157048 1042 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Gm15749-201ENSMUST00000161848 612 ntTSL 2 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Ccdc190-202ENSMUST00000175731 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Gm18513-201ENSMUST00000177313 560 ntBASIC13.04□□□□□ -0.32
Cacna1sQ02789 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cacna1sQ02789 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Gm10251-202ENSMUST00000181786 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Mettl8-204ENSMUST00000112186 2347 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Gm6225-201ENSMUST00000181558 1700 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Prpf38a-201ENSMUST00000079213 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 n-R5s2-201ENSMUST00000101968 119 ntBASIC13.03□□□□□ -0.32
Cacna1sQ02789 n-R5s194-201ENSMUST00000104719 119 ntBASIC13.03□□□□□ -0.32
Cacna1sQ02789 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC13.03□□□□□ -0.32
Cacna1sQ02789 Gm11279-201ENSMUST00000121524 1256 ntBASIC13.03□□□□□ -0.32
Cacna1sQ02789 Gm13564-201ENSMUST00000131533 657 ntTSL 3 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Fhad1os1-201ENSMUST00000146094 997 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 4930479D17Rik-201ENSMUST00000146754 740 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 n-R5s112-201ENSMUST00000178208 119 ntBASIC13.03□□□□□ -0.32
Cacna1sQ02789 n-R5s125-201ENSMUST00000179377 119 ntBASIC13.03□□□□□ -0.32
Cacna1sQ02789 n-R5s120-201ENSMUST00000180000 119 ntBASIC13.03□□□□□ -0.32
Cacna1sQ02789 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Gm34664-202ENSMUST00000207661 1032 ntTSL 5 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Rnase11-201ENSMUST00000076106 713 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 n-R5s33-201ENSMUST00000093713 119 ntBASIC13.03□□□□□ -0.32
Cacna1sQ02789 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Lyrm7-205ENSMUST00000144164 1674 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.03□□□□□ -0.32
Cacna1sQ02789 Olfr1491-204ENSMUST00000216366 1726 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.03□□□□□ -0.32
Cacna1sQ02789 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1sQ02789 BB014433-203ENSMUST00000179941 1543 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Cacna1sQ02789 Gm10408-201ENSMUST00000096168 1512 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms