Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Gm7143-201ENSMUST00000222811 859 ntBASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssu72Q9CY97 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ssu72Q9CY97 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.81■□□□□ 0.76
Ssu72Q9CY97 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ssu72Q9CY97 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ssu72Q9CY97 Gm10399-202ENSMUST00000202768 748 ntBASIC19.81■□□□□ 0.76
Ssu72Q9CY97 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ssu72Q9CY97 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ssu72Q9CY97 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssu72Q9CY97 Gm45444-201ENSMUST00000211394 898 ntBASIC19.8■□□□□ 0.76
Ssu72Q9CY97 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.8■□□□□ 0.76
Ssu72Q9CY97 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssu72Q9CY97 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ssu72Q9CY97 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssu72Q9CY97 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ssu72Q9CY97 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.79■□□□□ 0.76
Ssu72Q9CY97 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ssu72Q9CY97 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ssu72Q9CY97 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ssu72Q9CY97 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssu72Q9CY97 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ssu72Q9CY97 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ssu72Q9CY97 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ssu72Q9CY97 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ssu72Q9CY97 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ssu72Q9CY97 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssu72Q9CY97 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ssu72Q9CY97 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ssu72Q9CY97 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ssu72Q9CY97 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.77■□□□□ 0.75
Ssu72Q9CY97 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ssu72Q9CY97 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ssu72Q9CY97 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssu72Q9CY97 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssu72Q9CY97 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ssu72Q9CY97 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssu72Q9CY97 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ssu72Q9CY97 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ssu72Q9CY97 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.75■□□□□ 0.75
Ssu72Q9CY97 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssu72Q9CY97 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Ssu72Q9CY97 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.74■□□□□ 0.75
Ssu72Q9CY97 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ssu72Q9CY97 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.74■□□□□ 0.75
Ssu72Q9CY97 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssu72Q9CY97 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ssu72Q9CY97 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ssu72Q9CY97 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms