Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chd1lQ9CXF7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Chd1lQ9CXF7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chd1lQ9CXF7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Chd1lQ9CXF7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chd1lQ9CXF7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chd1lQ9CXF7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chd1lQ9CXF7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Chd1lQ9CXF7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chd1lQ9CXF7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chd1lQ9CXF7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chd1lQ9CXF7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chd1lQ9CXF7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Chd1lQ9CXF7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chd1lQ9CXF7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Chd1lQ9CXF7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chd1lQ9CXF7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chd1lQ9CXF7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chd1lQ9CXF7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chd1lQ9CXF7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chd1lQ9CXF7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chd1lQ9CXF7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chd1lQ9CXF7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Chd1lQ9CXF7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chd1lQ9CXF7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Chd1lQ9CXF7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chd1lQ9CXF7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chd1lQ9CXF7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Chd1lQ9CXF7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chd1lQ9CXF7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chd1lQ9CXF7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chd1lQ9CXF7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Chd1lQ9CXF7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chd1lQ9CXF7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Chd1lQ9CXF7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Chd1lQ9CXF7 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.44■■□□□ 1.18
Chd1lQ9CXF7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Chd1lQ9CXF7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Chd1lQ9CXF7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC22.44■■□□□ 1.18
Chd1lQ9CXF7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Chd1lQ9CXF7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Chd1lQ9CXF7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Chd1lQ9CXF7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Chd1lQ9CXF7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Chd1lQ9CXF7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chd1lQ9CXF7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Chd1lQ9CXF7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Chd1lQ9CXF7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chd1lQ9CXF7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chd1lQ9CXF7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Chd1lQ9CXF7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chd1lQ9CXF7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chd1lQ9CXF7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Chd1lQ9CXF7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chd1lQ9CXF7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chd1lQ9CXF7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Chd1lQ9CXF7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Chd1lQ9CXF7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chd1lQ9CXF7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Chd1lQ9CXF7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Chd1lQ9CXF7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Chd1lQ9CXF7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Chd1lQ9CXF7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Chd1lQ9CXF7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms