Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.48■□□□□ 0.87
Ddx47Q9CWX9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx47Q9CWX9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx47Q9CWX9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ddx47Q9CWX9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Ddx47Q9CWX9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx47Q9CWX9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx47Q9CWX9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.46■□□□□ 0.87
Ddx47Q9CWX9 Gm27502-201ENSMUST00000183495 199 ntBASIC20.46■□□□□ 0.87
Ddx47Q9CWX9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx47Q9CWX9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx47Q9CWX9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx47Q9CWX9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx47Q9CWX9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx47Q9CWX9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx47Q9CWX9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx47Q9CWX9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ddx47Q9CWX9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx47Q9CWX9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx47Q9CWX9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx47Q9CWX9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.43■□□□□ 0.86
Ddx47Q9CWX9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx47Q9CWX9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx47Q9CWX9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.43■□□□□ 0.86
Ddx47Q9CWX9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx47Q9CWX9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ddx47Q9CWX9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx47Q9CWX9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx47Q9CWX9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx47Q9CWX9 Gm14523-201ENSMUST00000117260 558 ntBASIC20.42■□□□□ 0.86
Ddx47Q9CWX9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx47Q9CWX9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx47Q9CWX9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx47Q9CWX9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx47Q9CWX9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx47Q9CWX9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
Ddx47Q9CWX9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ddx47Q9CWX9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx47Q9CWX9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx47Q9CWX9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx47Q9CWX9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx47Q9CWX9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ddx47Q9CWX9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ddx47Q9CWX9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
Ddx47Q9CWX9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx47Q9CWX9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx47Q9CWX9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx47Q9CWX9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ddx47Q9CWX9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx47Q9CWX9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx47Q9CWX9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx47Q9CWX9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx47Q9CWX9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx47Q9CWX9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx47Q9CWX9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx47Q9CWX9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ddx47Q9CWX9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx47Q9CWX9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ddx47Q9CWX9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx47Q9CWX9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx47Q9CWX9 Gm11175-201ENSMUST00000116172 543 ntBASIC20.38■□□□□ 0.85
Ddx47Q9CWX9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx47Q9CWX9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Ddx47Q9CWX9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ddx47Q9CWX9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx47Q9CWX9 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.38■□□□□ 0.85
Ddx47Q9CWX9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Ddx47Q9CWX9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx47Q9CWX9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx47Q9CWX9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx47Q9CWX9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ddx47Q9CWX9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx47Q9CWX9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.37■□□□□ 0.85
Ddx47Q9CWX9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms