Protein–RNA interactions for Protein: Q9CQ47

4921530L21Rik, RIKEN cDNA 4921530L21 gene, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4921530L21RikQ9CQ47 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Gm11175-201ENSMUST00000116172 543 ntBASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
4921530L21RikQ9CQ47 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
4921530L21RikQ9CQ47 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
4921530L21RikQ9CQ47 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
4921530L21RikQ9CQ47 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
4921530L21RikQ9CQ47 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
4921530L21RikQ9CQ47 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
4921530L21RikQ9CQ47 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
4921530L21RikQ9CQ47 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
4921530L21RikQ9CQ47 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
4921530L21RikQ9CQ47 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
4921530L21RikQ9CQ47 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
4921530L21RikQ9CQ47 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4921530L21RikQ9CQ47 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
4921530L21RikQ9CQ47 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4921530L21RikQ9CQ47 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
4921530L21RikQ9CQ47 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4921530L21RikQ9CQ47 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4921530L21RikQ9CQ47 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
4921530L21RikQ9CQ47 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4921530L21RikQ9CQ47 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4921530L21RikQ9CQ47 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
4921530L21RikQ9CQ47 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
4921530L21RikQ9CQ47 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.27■□□□□ 0.68
4921530L21RikQ9CQ47 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
4921530L21RikQ9CQ47 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
4921530L21RikQ9CQ47 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
4921530L21RikQ9CQ47 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
4921530L21RikQ9CQ47 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
4921530L21RikQ9CQ47 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.27■□□□□ 0.68
4921530L21RikQ9CQ47 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
4921530L21RikQ9CQ47 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
4921530L21RikQ9CQ47 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
4921530L21RikQ9CQ47 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.26■□□□□ 0.67
4921530L21RikQ9CQ47 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
4921530L21RikQ9CQ47 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.25■□□□□ 0.67
4921530L21RikQ9CQ47 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
4921530L21RikQ9CQ47 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
4921530L21RikQ9CQ47 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.25■□□□□ 0.67
4921530L21RikQ9CQ47 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
4921530L21RikQ9CQ47 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
4921530L21RikQ9CQ47 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
4921530L21RikQ9CQ47 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.24■□□□□ 0.67
4921530L21RikQ9CQ47 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.24■□□□□ 0.67
4921530L21RikQ9CQ47 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
4921530L21RikQ9CQ47 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
4921530L21RikQ9CQ47 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
4921530L21RikQ9CQ47 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
4921530L21RikQ9CQ47 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
4921530L21RikQ9CQ47 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
4921530L21RikQ9CQ47 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
4921530L21RikQ9CQ47 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms