Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AC137767.1-201ENST00000602918 1920 ntBASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 MIR4281-201ENST00000580852 62 ntBASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 PVT1_1.1-201ENST00000615125 194 ntBASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
BBS1Q8NFJ9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BBS1Q8NFJ9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 AC004448.1-201ENST00000458332 883 ntBASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BBS1Q8NFJ9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BBS1Q8NFJ9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BBS1Q8NFJ9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
BBS1Q8NFJ9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BBS1Q8NFJ9 BHLHE23-202ENST00000612929 1109 ntBASIC20.03■□□□□ 0.8
BBS1Q8NFJ9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BBS1Q8NFJ9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BBS1Q8NFJ9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
BBS1Q8NFJ9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
BBS1Q8NFJ9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.02■□□□□ 0.8
BBS1Q8NFJ9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.02■□□□□ 0.8
BBS1Q8NFJ9 THA1P-201ENST00000590384 1145 ntBASIC20.02■□□□□ 0.8
BBS1Q8NFJ9 NTF6A-201ENST00000591175 560 ntBASIC20.02■□□□□ 0.8
BBS1Q8NFJ9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.02■□□□□ 0.8
BBS1Q8NFJ9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.02■□□□□ 0.8
BBS1Q8NFJ9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BBS1Q8NFJ9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BBS1Q8NFJ9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
BBS1Q8NFJ9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BBS1Q8NFJ9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.02■□□□□ 0.79
BBS1Q8NFJ9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BBS1Q8NFJ9 AC139530.1-201ENST00000575312 1977 ntBASIC20.01■□□□□ 0.79
BBS1Q8NFJ9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.01■□□□□ 0.79
BBS1Q8NFJ9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
BBS1Q8NFJ9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BBS1Q8NFJ9 KRT18P24-201ENST00000344739 1156 ntBASIC20.01■□□□□ 0.79
BBS1Q8NFJ9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BBS1Q8NFJ9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BBS1Q8NFJ9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20■□□□□ 0.79
BBS1Q8NFJ9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
BBS1Q8NFJ9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20■□□□□ 0.79
BBS1Q8NFJ9 ABHD17AP5-201ENST00000580133 923 ntBASIC20■□□□□ 0.79
BBS1Q8NFJ9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20■□□□□ 0.79
BBS1Q8NFJ9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20■□□□□ 0.79
BBS1Q8NFJ9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BBS1Q8NFJ9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BBS1Q8NFJ9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BBS1Q8NFJ9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20■□□□□ 0.79
BBS1Q8NFJ9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
BBS1Q8NFJ9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 AC004987.1-201ENST00000428627 508 ntBASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 AC080038.3-201ENST00000623346 1952 ntBASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BBS1Q8NFJ9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms