Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn4rl1Q8K0S5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rtn4rl1Q8K0S5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.37■□□□□ 0.85
Rtn4rl1Q8K0S5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn4rl1Q8K0S5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn4rl1Q8K0S5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.36■□□□□ 0.85
Rtn4rl1Q8K0S5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn4rl1Q8K0S5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn4rl1Q8K0S5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.36■□□□□ 0.85
Rtn4rl1Q8K0S5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rtn4rl1Q8K0S5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rtn4rl1Q8K0S5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rl1Q8K0S5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rl1Q8K0S5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rl1Q8K0S5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rl1Q8K0S5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rl1Q8K0S5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rtn4rl1Q8K0S5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Rtn4rl1Q8K0S5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rl1Q8K0S5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Rtn4rl1Q8K0S5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rl1Q8K0S5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rtn4rl1Q8K0S5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rl1Q8K0S5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rl1Q8K0S5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rl1Q8K0S5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rl1Q8K0S5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rl1Q8K0S5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rl1Q8K0S5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rl1Q8K0S5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.34■□□□□ 0.85
Rtn4rl1Q8K0S5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rl1Q8K0S5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rtn4rl1Q8K0S5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rtn4rl1Q8K0S5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rtn4rl1Q8K0S5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rtn4rl1Q8K0S5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rtn4rl1Q8K0S5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rtn4rl1Q8K0S5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rtn4rl1Q8K0S5 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.33■□□□□ 0.85
Rtn4rl1Q8K0S5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rtn4rl1Q8K0S5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rtn4rl1Q8K0S5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rtn4rl1Q8K0S5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rtn4rl1Q8K0S5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtn4rl1Q8K0S5 Gm7514-201ENSMUST00000209475 934 ntBASIC20.32■□□□□ 0.84
Rtn4rl1Q8K0S5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtn4rl1Q8K0S5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rtn4rl1Q8K0S5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rtn4rl1Q8K0S5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtn4rl1Q8K0S5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn4rl1Q8K0S5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn4rl1Q8K0S5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn4rl1Q8K0S5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn4rl1Q8K0S5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.3■□□□□ 0.84
Rtn4rl1Q8K0S5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.3■□□□□ 0.84
Rtn4rl1Q8K0S5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.3■□□□□ 0.84
Rtn4rl1Q8K0S5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rtn4rl1Q8K0S5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn4rl1Q8K0S5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn4rl1Q8K0S5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.29■□□□□ 0.84
Rtn4rl1Q8K0S5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn4rl1Q8K0S5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn4rl1Q8K0S5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn4rl1Q8K0S5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn4rl1Q8K0S5 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.28■□□□□ 0.84
Rtn4rl1Q8K0S5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.28■□□□□ 0.84
Rtn4rl1Q8K0S5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn4rl1Q8K0S5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.28■□□□□ 0.84
Rtn4rl1Q8K0S5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn4rl1Q8K0S5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn4rl1Q8K0S5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn4rl1Q8K0S5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn4rl1Q8K0S5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rtn4rl1Q8K0S5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn4rl1Q8K0S5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn4rl1Q8K0S5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn4rl1Q8K0S5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn4rl1Q8K0S5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn4rl1Q8K0S5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn4rl1Q8K0S5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rtn4rl1Q8K0S5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn4rl1Q8K0S5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn4rl1Q8K0S5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn4rl1Q8K0S5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn4rl1Q8K0S5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn4rl1Q8K0S5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.26■□□□□ 0.83
Rtn4rl1Q8K0S5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms