Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL27A1Q8IZC6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 AC022211.4-201ENST00000625094 2161 ntBASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 RAP2CP1-201ENST00000605103 478 ntBASIC21.37■■□□□ 1.01
COL27A1Q8IZC6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.36■■□□□ 1.01
COL27A1Q8IZC6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL27A1Q8IZC6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL27A1Q8IZC6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.36■■□□□ 1.01
COL27A1Q8IZC6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.36■■□□□ 1.01
COL27A1Q8IZC6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
COL27A1Q8IZC6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 FP325331.1-202ENST00000623531 1380 ntBASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 AP003733.4-201ENST00000623785 1697 ntBASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 DUX4L4-201ENST00000566884 1269 ntBASIC21.35■■□□□ 1.01
COL27A1Q8IZC6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
COL27A1Q8IZC6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.34■■□□□ 1.01
COL27A1Q8IZC6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL27A1Q8IZC6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL27A1Q8IZC6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL27A1Q8IZC6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.34■■□□□ 1.01
COL27A1Q8IZC6 AP005435.1-201ENST00000529293 1178 ntBASIC21.34■■□□□ 1.01
COL27A1Q8IZC6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.34■■□□□ 1.01
COL27A1Q8IZC6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
COL27A1Q8IZC6 AC144652.1-201ENST00000609974 1624 ntBASIC21.34■■□□□ 1.01
COL27A1Q8IZC6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.33■■□□□ 1.01
COL27A1Q8IZC6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.33■■□□□ 1.01
COL27A1Q8IZC6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL27A1Q8IZC6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL27A1Q8IZC6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
COL27A1Q8IZC6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
COL27A1Q8IZC6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL27A1Q8IZC6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
COL27A1Q8IZC6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.33■■□□□ 1
COL27A1Q8IZC6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.32■■□□□ 1
COL27A1Q8IZC6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.32■■□□□ 1
COL27A1Q8IZC6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.32■■□□□ 1
COL27A1Q8IZC6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.32■■□□□ 1
COL27A1Q8IZC6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COL27A1Q8IZC6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.32■■□□□ 1
COL27A1Q8IZC6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.32■■□□□ 1
COL27A1Q8IZC6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.32■■□□□ 1
COL27A1Q8IZC6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL27A1Q8IZC6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL27A1Q8IZC6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL27A1Q8IZC6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL27A1Q8IZC6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL27A1Q8IZC6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL27A1Q8IZC6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.31■■□□□ 1
COL27A1Q8IZC6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL27A1Q8IZC6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL27A1Q8IZC6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.31■■□□□ 1
COL27A1Q8IZC6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL27A1Q8IZC6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.31■■□□□ 1
COL27A1Q8IZC6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.31■■□□□ 1
COL27A1Q8IZC6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.31■■□□□ 1
COL27A1Q8IZC6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL27A1Q8IZC6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL27A1Q8IZC6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
COL27A1Q8IZC6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL27A1Q8IZC6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL27A1Q8IZC6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.3■■□□□ 1
COL27A1Q8IZC6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.3■■□□□ 1
COL27A1Q8IZC6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL27A1Q8IZC6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
COL27A1Q8IZC6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL27A1Q8IZC6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL27A1Q8IZC6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
COL27A1Q8IZC6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms