Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SprnQ8BWU1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SprnQ8BWU1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SprnQ8BWU1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.64■□□□□ 0.41
SprnQ8BWU1 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.64■□□□□ 0.41
SprnQ8BWU1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SprnQ8BWU1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SprnQ8BWU1 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.64■□□□□ 0.41
SprnQ8BWU1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SprnQ8BWU1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SprnQ8BWU1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SprnQ8BWU1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SprnQ8BWU1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SprnQ8BWU1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SprnQ8BWU1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SprnQ8BWU1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.63■□□□□ 0.41
SprnQ8BWU1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.63■□□□□ 0.41
SprnQ8BWU1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SprnQ8BWU1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SprnQ8BWU1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.63■□□□□ 0.41
SprnQ8BWU1 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.63■□□□□ 0.41
SprnQ8BWU1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SprnQ8BWU1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.62■□□□□ 0.41
SprnQ8BWU1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SprnQ8BWU1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SprnQ8BWU1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SprnQ8BWU1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SprnQ8BWU1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SprnQ8BWU1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SprnQ8BWU1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SprnQ8BWU1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SprnQ8BWU1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SprnQ8BWU1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.61■□□□□ 0.41
SprnQ8BWU1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.61■□□□□ 0.41
SprnQ8BWU1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SprnQ8BWU1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SprnQ8BWU1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SprnQ8BWU1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SprnQ8BWU1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SprnQ8BWU1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SprnQ8BWU1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SprnQ8BWU1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.6■□□□□ 0.41
SprnQ8BWU1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SprnQ8BWU1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SprnQ8BWU1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SprnQ8BWU1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SprnQ8BWU1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SprnQ8BWU1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SprnQ8BWU1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SprnQ8BWU1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SprnQ8BWU1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.6■□□□□ 0.41
SprnQ8BWU1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SprnQ8BWU1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SprnQ8BWU1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SprnQ8BWU1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SprnQ8BWU1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SprnQ8BWU1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SprnQ8BWU1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SprnQ8BWU1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SprnQ8BWU1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SprnQ8BWU1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SprnQ8BWU1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SprnQ8BWU1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SprnQ8BWU1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SprnQ8BWU1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SprnQ8BWU1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SprnQ8BWU1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SprnQ8BWU1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SprnQ8BWU1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SprnQ8BWU1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SprnQ8BWU1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SprnQ8BWU1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
SprnQ8BWU1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SprnQ8BWU1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SprnQ8BWU1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SprnQ8BWU1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SprnQ8BWU1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SprnQ8BWU1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms