Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim6Q8BGE7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim6Q8BGE7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim6Q8BGE7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Trim6Q8BGE7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim6Q8BGE7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim6Q8BGE7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.08■□□□□ 0.97
Trim6Q8BGE7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.08■□□□□ 0.96
Trim6Q8BGE7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim6Q8BGE7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim6Q8BGE7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.07■□□□□ 0.96
Trim6Q8BGE7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim6Q8BGE7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim6Q8BGE7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim6Q8BGE7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim6Q8BGE7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim6Q8BGE7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Trim6Q8BGE7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.06■□□□□ 0.96
Trim6Q8BGE7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.06■□□□□ 0.96
Trim6Q8BGE7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim6Q8BGE7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim6Q8BGE7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim6Q8BGE7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim6Q8BGE7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim6Q8BGE7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim6Q8BGE7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.05■□□□□ 0.96
Trim6Q8BGE7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim6Q8BGE7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trim6Q8BGE7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim6Q8BGE7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim6Q8BGE7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.05■□□□□ 0.96
Trim6Q8BGE7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim6Q8BGE7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim6Q8BGE7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim6Q8BGE7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim6Q8BGE7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim6Q8BGE7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Trim6Q8BGE7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Trim6Q8BGE7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim6Q8BGE7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim6Q8BGE7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim6Q8BGE7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim6Q8BGE7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim6Q8BGE7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim6Q8BGE7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim6Q8BGE7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim6Q8BGE7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim6Q8BGE7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim6Q8BGE7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim6Q8BGE7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim6Q8BGE7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Trim6Q8BGE7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim6Q8BGE7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim6Q8BGE7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim6Q8BGE7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim6Q8BGE7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Trim6Q8BGE7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim6Q8BGE7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim6Q8BGE7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.01■□□□□ 0.95
Trim6Q8BGE7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim6Q8BGE7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim6Q8BGE7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trim6Q8BGE7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim6Q8BGE7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Trim6Q8BGE7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim6Q8BGE7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim6Q8BGE7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Trim6Q8BGE7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim6Q8BGE7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21■□□□□ 0.95
Trim6Q8BGE7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21■□□□□ 0.95
Trim6Q8BGE7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
Trim6Q8BGE7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim6Q8BGE7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim6Q8BGE7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim6Q8BGE7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim6Q8BGE7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim6Q8BGE7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim6Q8BGE7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim6Q8BGE7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim6Q8BGE7 Gm10399-202ENSMUST00000202768 748 ntBASIC20.98■□□□□ 0.95
Trim6Q8BGE7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim6Q8BGE7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim6Q8BGE7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim6Q8BGE7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trim6Q8BGE7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim6Q8BGE7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim6Q8BGE7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim6Q8BGE7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms