Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sema3bQ62177 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Sema3bQ62177 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sema3bQ62177 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sema3bQ62177 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sema3bQ62177 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
Sema3bQ62177 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sema3bQ62177 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sema3bQ62177 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sema3bQ62177 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sema3bQ62177 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.9■□□□□ 0.62
Sema3bQ62177 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sema3bQ62177 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sema3bQ62177 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sema3bQ62177 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sema3bQ62177 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sema3bQ62177 Smad6-203ENSMUST00000179458 273 ntBASIC18.89■□□□□ 0.61
Sema3bQ62177 AV356131-201ENSMUST00000206201 750 ntBASIC18.89■□□□□ 0.61
Sema3bQ62177 Gm10033-202ENSMUST00000211874 928 ntBASIC18.89■□□□□ 0.61
Sema3bQ62177 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sema3bQ62177 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sema3bQ62177 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sema3bQ62177 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sema3bQ62177 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sema3bQ62177 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sema3bQ62177 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sema3bQ62177 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sema3bQ62177 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.88■□□□□ 0.61
Sema3bQ62177 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sema3bQ62177 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.88■□□□□ 0.61
Sema3bQ62177 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sema3bQ62177 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sema3bQ62177 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sema3bQ62177 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sema3bQ62177 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sema3bQ62177 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.87■□□□□ 0.61
Sema3bQ62177 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.87■□□□□ 0.61
Sema3bQ62177 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sema3bQ62177 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sema3bQ62177 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sema3bQ62177 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sema3bQ62177 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.86■□□□□ 0.61
Sema3bQ62177 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sema3bQ62177 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sema3bQ62177 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sema3bQ62177 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sema3bQ62177 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sema3bQ62177 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sema3bQ62177 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Sema3bQ62177 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sema3bQ62177 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.85■□□□□ 0.61
Sema3bQ62177 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sema3bQ62177 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sema3bQ62177 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sema3bQ62177 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sema3bQ62177 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.85■□□□□ 0.61
Sema3bQ62177 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.85■□□□□ 0.61
Sema3bQ62177 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sema3bQ62177 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sema3bQ62177 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sema3bQ62177 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.85■□□□□ 0.61
Sema3bQ62177 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sema3bQ62177 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sema3bQ62177 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sema3bQ62177 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.84■□□□□ 0.61
Sema3bQ62177 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.84■□□□□ 0.61
Sema3bQ62177 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Sema3bQ62177 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sema3bQ62177 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sema3bQ62177 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sema3bQ62177 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.83■□□□□ 0.61
Sema3bQ62177 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sema3bQ62177 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.83■□□□□ 0.61
Sema3bQ62177 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sema3bQ62177 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Sema3bQ62177 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sema3bQ62177 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sema3bQ62177 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sema3bQ62177 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sema3bQ62177 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sema3bQ62177 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
Sema3bQ62177 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
Sema3bQ62177 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sema3bQ62177 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sema3bQ62177 Iqck-206ENSMUST00000208658 2891 ntBASIC18.82■□□□□ 0.6
Sema3bQ62177 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sema3bQ62177 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sema3bQ62177 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms