Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox17Q61473 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox17Q61473 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.66■□□□□ 0.58
Sox17Q61473 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox17Q61473 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox17Q61473 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox17Q61473 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sox17Q61473 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox17Q61473 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox17Q61473 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox17Q61473 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox17Q61473 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox17Q61473 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Sox17Q61473 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Sox17Q61473 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox17Q61473 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox17Q61473 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox17Q61473 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox17Q61473 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox17Q61473 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox17Q61473 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox17Q61473 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox17Q61473 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox17Q61473 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Sox17Q61473 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox17Q61473 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox17Q61473 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox17Q61473 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox17Q61473 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox17Q61473 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox17Q61473 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox17Q61473 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox17Q61473 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox17Q61473 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox17Q61473 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox17Q61473 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox17Q61473 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox17Q61473 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox17Q61473 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox17Q61473 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Sox17Q61473 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox17Q61473 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox17Q61473 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox17Q61473 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox17Q61473 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox17Q61473 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sox17Q61473 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox17Q61473 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.62■□□□□ 0.57
Sox17Q61473 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox17Q61473 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox17Q61473 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sox17Q61473 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox17Q61473 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox17Q61473 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sox17Q61473 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox17Q61473 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox17Q61473 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.61■□□□□ 0.57
Sox17Q61473 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Sox17Q61473 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.61■□□□□ 0.57
Sox17Q61473 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.61■□□□□ 0.57
Sox17Q61473 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.61■□□□□ 0.57
Sox17Q61473 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sox17Q61473 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox17Q61473 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox17Q61473 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox17Q61473 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox17Q61473 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox17Q61473 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox17Q61473 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox17Q61473 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox17Q61473 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox17Q61473 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox17Q61473 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sox17Q61473 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox17Q61473 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.6■□□□□ 0.57
Sox17Q61473 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox17Q61473 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Sox17Q61473 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.6■□□□□ 0.57
Sox17Q61473 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox17Q61473 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox17Q61473 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox17Q61473 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.59■□□□□ 0.57
Sox17Q61473 Gm10420-201ENSMUST00000121713 882 ntBASIC18.59■□□□□ 0.57
Sox17Q61473 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.59■□□□□ 0.57
Sox17Q61473 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sox17Q61473 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox17Q61473 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox17Q61473 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Sox17Q61473 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox17Q61473 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox17Q61473 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Sox17Q61473 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox17Q61473 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.58■□□□□ 0.57
Sox17Q61473 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.58■□□□□ 0.57
Sox17Q61473 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox17Q61473 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Sox17Q61473 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.58■□□□□ 0.56
Sox17Q61473 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox17Q61473 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox17Q61473 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms