Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-3Q5R1C3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3-3Q5R1C3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Gm44428-201ENSMUST00000204474 874 ntBASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3-3Q5R1C3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3-3Q5R1C3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav3-3Q5R1C3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav3-3Q5R1C3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav3-3Q5R1C3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Trav3-3Q5R1C3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-3Q5R1C3 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.83□□□□□ -0.04
Trav3-3Q5R1C3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-3Q5R1C3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav3-3Q5R1C3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-3Q5R1C3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-3Q5R1C3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-3Q5R1C3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-3Q5R1C3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3-3Q5R1C3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav3-3Q5R1C3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms