Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig3P97386 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Lig3P97386 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Lig3P97386 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig3P97386 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.55■■□□□ 1.04
Lig3P97386 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig3P97386 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.55■■□□□ 1.04
Lig3P97386 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig3P97386 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.55■■□□□ 1.04
Lig3P97386 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lig3P97386 Gm27011-201ENSMUST00000182352 972 ntBASIC21.55■■□□□ 1.04
Lig3P97386 Gm43173-201ENSMUST00000202246 593 ntBASIC21.55■■□□□ 1.04
Lig3P97386 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Lig3P97386 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Lig3P97386 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig3P97386 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig3P97386 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.55■■□□□ 1.04
Lig3P97386 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lig3P97386 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Lig3P97386 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lig3P97386 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Lig3P97386 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lig3P97386 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Lig3P97386 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.54■■□□□ 1.04
Lig3P97386 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lig3P97386 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lig3P97386 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lig3P97386 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lig3P97386 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.53■■□□□ 1.04
Lig3P97386 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Lig3P97386 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Lig3P97386 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lig3P97386 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lig3P97386 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
Lig3P97386 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lig3P97386 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lig3P97386 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lig3P97386 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lig3P97386 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lig3P97386 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lig3P97386 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.52■■□□□ 1.04
Lig3P97386 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Lig3P97386 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lig3P97386 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Lig3P97386 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lig3P97386 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Lig3P97386 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lig3P97386 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Lig3P97386 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Lig3P97386 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lig3P97386 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lig3P97386 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.51■■□□□ 1.03
Lig3P97386 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.51■■□□□ 1.03
Lig3P97386 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Lig3P97386 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.5■■□□□ 1.03
Lig3P97386 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lig3P97386 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.5■■□□□ 1.03
Lig3P97386 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lig3P97386 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lig3P97386 Gm10493-201ENSMUST00000097270 612 ntBASIC21.5■■□□□ 1.03
Lig3P97386 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lig3P97386 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lig3P97386 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig3P97386 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig3P97386 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
Lig3P97386 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.49■■□□□ 1.03
Lig3P97386 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig3P97386 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig3P97386 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lig3P97386 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lig3P97386 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lig3P97386 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lig3P97386 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.48■■□□□ 1.03
Lig3P97386 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.48■■□□□ 1.03
Lig3P97386 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lig3P97386 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lig3P97386 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lig3P97386 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Lig3P97386 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig3P97386 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig3P97386 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig3P97386 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig3P97386 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lig3P97386 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig3P97386 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.47■■□□□ 1.03
Lig3P97386 Gm37179-201ENSMUST00000194862 823 ntBASIC21.47■■□□□ 1.03
Lig3P97386 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig3P97386 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Lig3P97386 Golph3-202ENSMUST00000226517 2359 ntBASIC21.47■■□□□ 1.03
Lig3P97386 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig3P97386 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lig3P97386 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Lig3P97386 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Lig3P97386 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lig3P97386 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lig3P97386 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Lig3P97386 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lig3P97386 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lig3P97386 Gm10849-201ENSMUST00000100397 618 ntBASIC21.45■■□□□ 1.02
Lig3P97386 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms