Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt6aP50446 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt6aP50446 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt6aP50446 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt6aP50446 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt6aP50446 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Krt6aP50446 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.76■□□□□ 0.75
Krt6aP50446 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Krt6aP50446 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Krt6aP50446 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Krt6aP50446 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Krt6aP50446 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Krt6aP50446 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Krt6aP50446 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Krt6aP50446 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Krt6aP50446 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt6aP50446 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt6aP50446 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Krt6aP50446 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Krt6aP50446 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt6aP50446 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt6aP50446 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Krt6aP50446 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Krt6aP50446 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Krt6aP50446 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.73■□□□□ 0.75
Krt6aP50446 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Krt6aP50446 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Krt6aP50446 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt6aP50446 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Krt6aP50446 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Krt6aP50446 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.72■□□□□ 0.75
Krt6aP50446 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt6aP50446 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt6aP50446 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt6aP50446 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Krt6aP50446 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Krt6aP50446 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Krt6aP50446 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Krt6aP50446 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt6aP50446 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt6aP50446 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt6aP50446 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt6aP50446 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt6aP50446 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt6aP50446 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Krt6aP50446 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt6aP50446 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Krt6aP50446 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt6aP50446 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt6aP50446 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.7■□□□□ 0.74
Krt6aP50446 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.7■□□□□ 0.74
Krt6aP50446 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.7■□□□□ 0.74
Krt6aP50446 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Krt6aP50446 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Krt6aP50446 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Krt6aP50446 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.7■□□□□ 0.74
Krt6aP50446 Gm40881-201ENSMUST00000223397 166 ntBASIC19.69■□□□□ 0.74
Krt6aP50446 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Krt6aP50446 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt6aP50446 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Krt6aP50446 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Krt6aP50446 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Krt6aP50446 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
Krt6aP50446 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Krt6aP50446 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Krt6aP50446 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Krt6aP50446 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Krt6aP50446 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Krt6aP50446 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Krt6aP50446 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.68■□□□□ 0.74
Krt6aP50446 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.68■□□□□ 0.74
Krt6aP50446 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Krt6aP50446 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.68■□□□□ 0.74
Krt6aP50446 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.68■□□□□ 0.74
Krt6aP50446 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Krt6aP50446 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Krt6aP50446 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Krt6aP50446 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Krt6aP50446 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.67■□□□□ 0.74
Krt6aP50446 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Krt6aP50446 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.67■□□□□ 0.74
Krt6aP50446 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Krt6aP50446 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Krt6aP50446 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Krt6aP50446 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Krt6aP50446 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Krt6aP50446 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt6aP50446 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Krt6aP50446 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms