Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp28P10078 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp28P10078 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Zfp28P10078 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Zfp28P10078 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp28P10078 Mir6538-201ENSMUST00000183713 110 ntBASIC18.29■□□□□ 0.52
Zfp28P10078 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Zfp28P10078 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp28P10078 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Zfp28P10078 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.28■□□□□ 0.52
Zfp28P10078 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp28P10078 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp28P10078 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp28P10078 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.28■□□□□ 0.52
Zfp28P10078 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Zfp28P10078 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zfp28P10078 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Zfp28P10078 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp28P10078 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp28P10078 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp28P10078 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Zfp28P10078 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp28P10078 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Zfp28P10078 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.27■□□□□ 0.52
Zfp28P10078 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Zfp28P10078 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Zfp28P10078 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Zfp28P10078 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp28P10078 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp28P10078 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.26■□□□□ 0.51
Zfp28P10078 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp28P10078 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp28P10078 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp28P10078 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp28P10078 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Zfp28P10078 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp28P10078 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp28P10078 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zfp28P10078 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.26■□□□□ 0.51
Zfp28P10078 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Zfp28P10078 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zfp28P10078 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.24■□□□□ 0.51
Zfp28P10078 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zfp28P10078 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Zfp28P10078 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Zfp28P10078 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Zfp28P10078 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Zfp28P10078 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zfp28P10078 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.23■□□□□ 0.51
Zfp28P10078 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp28P10078 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp28P10078 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp28P10078 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp28P10078 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp28P10078 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.23■□□□□ 0.51
Zfp28P10078 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Zfp28P10078 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.23■□□□□ 0.51
Zfp28P10078 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp28P10078 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp28P10078 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zfp28P10078 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Zfp28P10078 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Zfp28P10078 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Zfp28P10078 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zfp28P10078 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Zfp28P10078 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.21■□□□□ 0.51
Zfp28P10078 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Zfp28P10078 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Zfp28P10078 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zfp28P10078 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.21■□□□□ 0.5
Zfp28P10078 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Zfp28P10078 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zfp28P10078 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Zfp28P10078 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms