Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
P06320 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
P06320 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
P06320 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC12.58□□□□□ -0.4
P06320 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
P06320 Gm5131-201ENSMUST00000212776 1238 ntBASIC12.58□□□□□ -0.4
P06320 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06320 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06320 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06320 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06320 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06320 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06320 Gm43545-201ENSMUST00000196765 2779 ntBASIC12.57□□□□□ -0.4
P06320 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06320 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC12.57□□□□□ -0.4
P06320 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06320 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC12.57□□□□□ -0.4
P06320 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06320 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06320 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06320 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
P06320 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
P06320 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 AC158990.1-201ENSMUST00000221450 2016 ntBASIC12.56□□□□□ -0.4
P06320 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P06320 Gm10461-201ENSMUST00000202073 4786 ntBASIC12.56□□□□□ -0.4
P06320 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC12.56□□□□□ -0.4
P06320 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P06320 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06320 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
P06320 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 AC122428.2-201ENSMUST00000216321 1832 ntBASIC12.55□□□□□ -0.4
P06320 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P06320 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC12.55□□□□□ -0.4
P06320 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC12.55□□□□□ -0.4
P06320 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P06320 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC12.54□□□□□ -0.4
P06320 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC12.54□□□□□ -0.4
P06320 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
P06320 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
P06320 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC12.54□□□□□ -0.4
P06320 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC12.54□□□□□ -0.4
P06320 AC116713.1-201ENSMUST00000215074 430 ntBASIC12.54□□□□□ -0.4
P06320 Nsd1-206ENSMUST00000224918 1001 ntBASIC12.54□□□□□ -0.4
P06320 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.54□□□□□ -0.4
P06320 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC12.54□□□□□ -0.4
P06320 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P06320 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms