Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Gm9870-201ENSMUST00000063874 645 ntBASIC16.6■□□□□ 0.25
Cd74P04441 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.6■□□□□ 0.25
Cd74P04441 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.6■□□□□ 0.25
Cd74P04441 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cd74P04441 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd74P04441 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.6■□□□□ 0.25
Cd74P04441 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd74P04441 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cd74P04441 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.59■□□□□ 0.25
Cd74P04441 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd74P04441 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cd74P04441 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Cd74P04441 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd74P04441 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cd74P04441 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cd74P04441 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cd74P04441 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd74P04441 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd74P04441 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cd74P04441 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cd74P04441 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cd74P04441 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cd74P04441 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cd74P04441 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd74P04441 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd74P04441 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd74P04441 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd74P04441 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Cd74P04441 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Cd74P04441 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cd74P04441 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd74P04441 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cd74P04441 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cd74P04441 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd74P04441 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd74P04441 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd74P04441 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cd74P04441 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd74P04441 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd74P04441 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd74P04441 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cd74P04441 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd74P04441 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cd74P04441 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.56■□□□□ 0.24
Cd74P04441 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd74P04441 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.56■□□□□ 0.24
Cd74P04441 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd74P04441 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cd74P04441 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd74P04441 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd74P04441 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd74P04441 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd74P04441 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cd74P04441 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cd74P04441 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.55■□□□□ 0.24
Cd74P04441 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd74P04441 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd74P04441 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.55■□□□□ 0.24
Cd74P04441 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd74P04441 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.55■□□□□ 0.24
Cd74P04441 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cd74P04441 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.55■□□□□ 0.24
Cd74P04441 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.55■□□□□ 0.24
Cd74P04441 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cd74P04441 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Cd74P04441 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd74P04441 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd74P04441 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd74P04441 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd74P04441 Gm27454-201ENSMUST00000185090 204 ntBASIC16.54■□□□□ 0.24
Cd74P04441 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.54■□□□□ 0.24
Cd74P04441 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd74P04441 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cd74P04441 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd74P04441 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Cd74P04441 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.54■□□□□ 0.24
Cd74P04441 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Cd74P04441 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cd74P04441 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cd74P04441 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.54■□□□□ 0.24
Cd74P04441 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.54■□□□□ 0.24
Cd74P04441 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Cd74P04441 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.53■□□□□ 0.24
Cd74P04441 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd74P04441 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd74P04441 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cd74P04441 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cd74P04441 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd74P04441 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd74P04441 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd74P04441 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd74P04441 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.53■□□□□ 0.24
Cd74P04441 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd74P04441 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd74P04441 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cd74P04441 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cd74P04441 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.52■□□□□ 0.24
Cd74P04441 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cd74P04441 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cd74P04441 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms