Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pfdn2O70591 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pfdn2O70591 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pfdn2O70591 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pfdn2O70591 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pfdn2O70591 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pfdn2O70591 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pfdn2O70591 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pfdn2O70591 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pfdn2O70591 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.44■□□□□ 0.22
Pfdn2O70591 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pfdn2O70591 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pfdn2O70591 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pfdn2O70591 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pfdn2O70591 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pfdn2O70591 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pfdn2O70591 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pfdn2O70591 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.44■□□□□ 0.22
Pfdn2O70591 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pfdn2O70591 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.43■□□□□ 0.22
Pfdn2O70591 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pfdn2O70591 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pfdn2O70591 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pfdn2O70591 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pfdn2O70591 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pfdn2O70591 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pfdn2O70591 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pfdn2O70591 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pfdn2O70591 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pfdn2O70591 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pfdn2O70591 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.42■□□□□ 0.22
Pfdn2O70591 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pfdn2O70591 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pfdn2O70591 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pfdn2O70591 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pfdn2O70591 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pfdn2O70591 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Pfdn2O70591 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pfdn2O70591 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pfdn2O70591 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pfdn2O70591 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pfdn2O70591 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pfdn2O70591 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pfdn2O70591 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.41■□□□□ 0.22
Pfdn2O70591 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.41■□□□□ 0.22
Pfdn2O70591 Gm27502-201ENSMUST00000183495 199 ntBASIC16.41■□□□□ 0.22
Pfdn2O70591 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.41■□□□□ 0.22
Pfdn2O70591 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pfdn2O70591 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pfdn2O70591 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Pfdn2O70591 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pfdn2O70591 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pfdn2O70591 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pfdn2O70591 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pfdn2O70591 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pfdn2O70591 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pfdn2O70591 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pfdn2O70591 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.4■□□□□ 0.22
Pfdn2O70591 Mir6538-201ENSMUST00000183713 110 ntBASIC16.4■□□□□ 0.22
Pfdn2O70591 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pfdn2O70591 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.4■□□□□ 0.22
Pfdn2O70591 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.4■□□□□ 0.22
Pfdn2O70591 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pfdn2O70591 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pfdn2O70591 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.39■□□□□ 0.21
Pfdn2O70591 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pfdn2O70591 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pfdn2O70591 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pfdn2O70591 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pfdn2O70591 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pfdn2O70591 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pfdn2O70591 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pfdn2O70591 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.38■□□□□ 0.21
Pfdn2O70591 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.38■□□□□ 0.21
Pfdn2O70591 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pfdn2O70591 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pfdn2O70591 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.38■□□□□ 0.21
Pfdn2O70591 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Pfdn2O70591 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.38■□□□□ 0.21
Pfdn2O70591 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.38■□□□□ 0.21
Pfdn2O70591 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.38■□□□□ 0.21
Pfdn2O70591 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pfdn2O70591 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pfdn2O70591 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pfdn2O70591 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Pfdn2O70591 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pfdn2O70591 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pfdn2O70591 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms