Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-2A0A0G2JF93 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Gm7432-201ENSMUST00000210343 879 ntBASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Gm5131-201ENSMUST00000212776 1238 ntBASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-2A0A0G2JF93 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-2A0A0G2JF93 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-2A0A0G2JF93 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav13n-2A0A0G2JF93 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav13n-2A0A0G2JF93 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-2A0A0G2JF93 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-2A0A0G2JF93 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-2A0A0G2JF93 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-2A0A0G2JF93 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-2A0A0G2JF93 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav13n-2A0A0G2JF93 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-2A0A0G2JF93 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-2A0A0G2JF93 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-2A0A0G2JF93 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-2A0A0G2JF93 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-2A0A0G2JF93 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Gm11599-201ENSMUST00000118720 878 ntBASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-2A0A0G2JF93 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms