Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav19A0A0B4J1K4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav19A0A0B4J1K4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav19A0A0B4J1K4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav19A0A0B4J1K4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav19A0A0B4J1K4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav19A0A0B4J1K4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav19A0A0B4J1K4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav19A0A0B4J1K4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav19A0A0B4J1K4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav19A0A0B4J1K4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav19A0A0B4J1K4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav19A0A0B4J1K4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav19A0A0B4J1K4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav19A0A0B4J1K4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav19A0A0B4J1K4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav19A0A0B4J1K4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav19A0A0B4J1K4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav19A0A0B4J1K4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav19A0A0B4J1K4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav19A0A0B4J1K4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav19A0A0B4J1K4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav19A0A0B4J1K4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav19A0A0B4J1K4 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.84□□□□□ -0.03
Trav19A0A0B4J1K4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Trav19A0A0B4J1K4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav19A0A0B4J1K4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav19A0A0B4J1K4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav19A0A0B4J1K4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.83□□□□□ -0.03
Trav19A0A0B4J1K4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trav19A0A0B4J1K4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav19A0A0B4J1K4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav19A0A0B4J1K4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms