Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav21-dv12A0A075B6C4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav21-dv12A0A075B6C4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav21-dv12A0A075B6C4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav21-dv12A0A075B6C4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav21-dv12A0A075B6C4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav21-dv12A0A075B6C4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav21-dv12A0A075B6C4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav21-dv12A0A075B6C4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav21-dv12A0A075B6C4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav21-dv12A0A075B6C4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav21-dv12A0A075B6C4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav21-dv12A0A075B6C4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav21-dv12A0A075B6C4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav21-dv12A0A075B6C4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav21-dv12A0A075B6C4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav21-dv12A0A075B6C4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav21-dv12A0A075B6C4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav21-dv12A0A075B6C4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav21-dv12A0A075B6C4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav21-dv12A0A075B6C4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav21-dv12A0A075B6C4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav21-dv12A0A075B6C4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav21-dv12A0A075B6C4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav21-dv12A0A075B6C4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Trav21-dv12A0A075B6C4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav21-dv12A0A075B6C4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav21-dv12A0A075B6C4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Gm7417-201ENSMUST00000192950 473 ntBASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav21-dv12A0A075B6C4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav21-dv12A0A075B6C4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav21-dv12A0A075B6C4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav21-dv12A0A075B6C4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav21-dv12A0A075B6C4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav21-dv12A0A075B6C4 Etf1-202ENSMUST00000180351 108 ntBASIC15.24■□□□□ 0.03
Trav21-dv12A0A075B6C4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav21-dv12A0A075B6C4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav21-dv12A0A075B6C4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav21-dv12A0A075B6C4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav21-dv12A0A075B6C4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav21-dv12A0A075B6C4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav21-dv12A0A075B6C4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms