Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav12d-3A0A075B6A4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 AC117769.4-201ENSMUST00000225679 685 ntBASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav12d-3A0A075B6A4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12d-3A0A075B6A4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12d-3A0A075B6A4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-3A0A075B6A4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-3A0A075B6A4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-3A0A075B6A4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-3A0A075B6A4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-3A0A075B6A4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav12d-3A0A075B6A4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-3A0A075B6A4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-3A0A075B6A4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-3A0A075B6A4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12d-3A0A075B6A4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav12d-3A0A075B6A4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav12d-3A0A075B6A4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12d-3A0A075B6A4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12d-3A0A075B6A4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12d-3A0A075B6A4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12d-3A0A075B6A4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12d-3A0A075B6A4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12d-3A0A075B6A4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Gm44428-201ENSMUST00000204474 874 ntBASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12d-3A0A075B6A4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav12d-3A0A075B6A4 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms