Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-4A0A075B652 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-4A0A075B652 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-4A0A075B652 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-4A0A075B652 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-4A0A075B652 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-4A0A075B652 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-4A0A075B652 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav5-4A0A075B652 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav5-4A0A075B652 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-4A0A075B652 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-4A0A075B652 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-4A0A075B652 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-4A0A075B652 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.52■□□□□ 0.24
Trav5-4A0A075B652 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trav5-4A0A075B652 Gm7417-201ENSMUST00000192950 473 ntBASIC16.52■□□□□ 0.24
Trav5-4A0A075B652 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-4A0A075B652 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Trav5-4A0A075B652 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav5-4A0A075B652 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5-4A0A075B652 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5-4A0A075B652 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5-4A0A075B652 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav5-4A0A075B652 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav5-4A0A075B652 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.5■□□□□ 0.23
Trav5-4A0A075B652 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-4A0A075B652 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-4A0A075B652 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-4A0A075B652 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-4A0A075B652 Etf1-202ENSMUST00000180351 108 ntBASIC16.5■□□□□ 0.23
Trav5-4A0A075B652 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-4A0A075B652 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trav5-4A0A075B652 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav5-4A0A075B652 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav5-4A0A075B652 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-4A0A075B652 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-4A0A075B652 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-4A0A075B652 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav5-4A0A075B652 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-4A0A075B652 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-4A0A075B652 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-4A0A075B652 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-4A0A075B652 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav5-4A0A075B652 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav5-4A0A075B652 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav5-4A0A075B652 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms