Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-4-dv10A0A075B651 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-4-dv10A0A075B651 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.52■□□□□ 0.07
Trav4-4-dv10A0A075B651 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-4-dv10A0A075B651 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-4-dv10A0A075B651 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-4-dv10A0A075B651 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-4-dv10A0A075B651 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav4-4-dv10A0A075B651 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-4-dv10A0A075B651 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-4-dv10A0A075B651 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav4-4-dv10A0A075B651 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-4-dv10A0A075B651 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-4-dv10A0A075B651 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-4-dv10A0A075B651 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-4-dv10A0A075B651 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gm7143-201ENSMUST00000222811 859 ntBASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-4-dv10A0A075B651 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-4-dv10A0A075B651 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav4-4-dv10A0A075B651 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav4-4-dv10A0A075B651 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms