Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Fv4P11370 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Gm18014-201ENSMUST00000183369 817 ntBASIC10.24□□□□□ -0.77
Fv4P11370 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.24□□□□□ -0.77
Fv4P11370 Gm43138-201ENSMUST00000199123 708 ntBASIC10.24□□□□□ -0.77
Fv4P11370 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.24□□□□□ -0.77
Fv4P11370 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.24□□□□□ -0.77
Fv4P11370 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.24□□□□□ -0.77
Fv4P11370 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.24□□□□□ -0.77
Fv4P11370 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Fv4P11370 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.24□□□□□ -0.77
Fv4P11370 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Gm10179-201ENSMUST00000086233 688 ntBASIC10.24□□□□□ -0.77
Fv4P11370 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Fv4P11370 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.24□□□□□ -0.77
Fv4P11370 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Fv4P11370 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Fv4P11370 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.24□□□□□ -0.77
Fv4P11370 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Fv4P11370 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Fv4P11370 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.23□□□□□ -0.77
Fv4P11370 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Fv4P11370 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Fv4P11370 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Fv4P11370 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Fv4P11370 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Fv4P11370 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Gm22582-201ENSMUST00000102283 94 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Gm12029-201ENSMUST00000120073 832 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Gm12516-201ENSMUST00000120819 385 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Gm10169-201ENSMUST00000121822 348 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Gm24346-201ENSMUST00000158712 194 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Gm22138-201ENSMUST00000158748 128 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Fv4P11370 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.23□□□□□ -0.77
Fv4P11370 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.23□□□□□ -0.77
Fv4P11370 Gm8531-201ENSMUST00000188319 893 ntBASIC10.23□□□□□ -0.77
Fv4P11370 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Fv4P11370 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.23□□□□□ -0.77
Fv4P11370 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC10.23□□□□□ -0.77
Fv4P11370 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Fv4P11370 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Fv4P11370 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Fv4P11370 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Fv4P11370 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Fv4P11370 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC10.23□□□□□ -0.77
Fv4P11370 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Fv4P11370 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Fv4P11370 Gm7052-201ENSMUST00000167568 1512 ntBASIC10.23□□□□□ -0.77
Fv4P11370 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Fv4P11370 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms