Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RN7SL478P-201ENST00000584358 298 ntBASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 AC009118.3-201ENST00000622896 873 ntBASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 AC010601.2-201ENST00000623060 774 ntBASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 Z82244.2-201ENST00000632196 448 ntBASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHANK2Q9UPX8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SHANK2Q9UPX8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SHANK2Q9UPX8 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC19.89■□□□□ 0.78
SHANK2Q9UPX8 AC124319.4-201ENST00000622931 2161 ntBASIC19.89■□□□□ 0.78
SHANK2Q9UPX8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SHANK2Q9UPX8 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 CACYBPP3-201ENST00000406011 625 ntBASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 KRT18P63-201ENST00000505463 979 ntBASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 DERL1-204ENST00000519018 575 ntTSL 4 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 AL137779.3-201ENST00000553295 729 ntBASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHANK2Q9UPX8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 DLX4-206ENST00000611342 1662 ntBASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 FTH1P18-201ENST00000412071 549 ntBASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 AC092865.2-201ENST00000439409 971 ntBASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 AC010677.1-201ENST00000441690 412 ntBASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 RNASEH2CP1-201ENST00000454281 502 ntBASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 AF186996.6-201ENST00000485294 149 ntBASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 RN7SL300P-201ENST00000582522 318 ntBASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 AL590556.2-202ENST00000636906 844 ntBASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 AC005840.4-201ENST00000541242 2494 ntBASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.88■□□□□ 0.77
SHANK2Q9UPX8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.87■□□□□ 0.77
SHANK2Q9UPX8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SHANK2Q9UPX8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SHANK2Q9UPX8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SHANK2Q9UPX8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK2Q9UPX8 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK2Q9UPX8 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
SHANK2Q9UPX8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK2Q9UPX8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms