Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04224 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
P04224 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
P04224 Osbpl5-202ENSMUST00000119499 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P04224 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
P04224 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Fam53b-202ENSMUST00000097998 4341 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Tbx4-202ENSMUST00000108045 2959 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
P04224 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Gm15198-201ENSMUST00000117283 177 ntBASIC9.35□□□□□ -0.91
P04224 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.35□□□□□ -0.91
P04224 Gm13263-201ENSMUST00000121271 838 ntBASIC9.35□□□□□ -0.91
P04224 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
P04224 Gm16505-201ENSMUST00000179981 232 ntBASIC9.35□□□□□ -0.91
P04224 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.35□□□□□ -0.91
P04224 Gm27441-201ENSMUST00000185000 105 ntBASIC9.35□□□□□ -0.91
P04224 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Gm43630-201ENSMUST00000201550 776 ntBASIC9.35□□□□□ -0.91
P04224 Gm5302-201ENSMUST00000202130 796 ntBASIC9.35□□□□□ -0.91
P04224 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.35□□□□□ -0.91
P04224 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
P04224 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Olfr582-201ENSMUST00000098212 960 ntBASIC9.35□□□□□ -0.91
P04224 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.35□□□□□ -0.91
P04224 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
P04224 Adam17-201ENSMUST00000064536 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 AC117245.4-202ENSMUST00000214403 3816 ntTSL 5 BASIC9.35□□□□□ -0.91
P04224 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
P04224 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
P04224 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC9.34□□□□□ -0.91
P04224 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
P04224 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P04224 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Adamtsl1-209ENSMUST00000141889 7805 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
P04224 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
P04224 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
P04224 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P04224 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Rab44-201ENSMUST00000087942 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Gm38359-201ENSMUST00000191884 2225 ntBASIC9.34□□□□□ -0.91
P04224 Dhx30-219ENSMUST00000199529 4373 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P04224 Snord17-201ENSMUST00000104526 238 ntBASIC9.34□□□□□ -0.91
P04224 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P04224 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.34□□□□□ -0.91
P04224 Gm12579-201ENSMUST00000118040 783 ntBASIC9.34□□□□□ -0.91
P04224 Gm12501-201ENSMUST00000119163 529 ntBASIC9.34□□□□□ -0.91
P04224 Gm13350-201ENSMUST00000120519 479 ntBASIC9.34□□□□□ -0.91
P04224 Gm15329-201ENSMUST00000121408 155 ntBASIC9.34□□□□□ -0.91
P04224 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.34□□□□□ -0.91
P04224 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.34□□□□□ -0.91
P04224 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.34□□□□□ -0.91
P04224 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Gm7584-201ENSMUST00000175829 940 ntBASIC9.34□□□□□ -0.91
P04224 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
P04224 Gm7003-201ENSMUST00000195089 312 ntBASIC9.34□□□□□ -0.91
P04224 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.34□□□□□ -0.91
P04224 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.34□□□□□ -0.91
P04224 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms