Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Gm12030-201ENSMUST00000121917 223 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Gm37444-201ENSMUST00000193605 439 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Gm44814-201ENSMUST00000207018 434 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Syne3Q4FZC9 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Spata33-207ENSMUST00000212760 4074 ntBASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm3828-201ENSMUST00000121817 257 ntBASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm16030-201ENSMUST00000159098 603 ntBASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm9081-201ENSMUST00000182346 991 ntBASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm9135-201ENSMUST00000182963 990 ntBASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm28746-201ENSMUST00000187453 380 ntBASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Gm18776-201ENSMUST00000188833 654 ntBASIC11.37□□□□□ -0.59
Syne3Q4FZC9 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Syne3Q4FZC9 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms