Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.9□□□□□ -0.66
SftpbP50405 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.9□□□□□ -0.66
SftpbP50405 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.9□□□□□ -0.66
SftpbP50405 Gm20426-201ENSMUST00000173657 440 ntBASIC10.9□□□□□ -0.66
SftpbP50405 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
SftpbP50405 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.9□□□□□ -0.66
SftpbP50405 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
SftpbP50405 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.9□□□□□ -0.66
SftpbP50405 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.9□□□□□ -0.66
SftpbP50405 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.9□□□□□ -0.66
SftpbP50405 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SftpbP50405 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.9□□□□□ -0.66
SftpbP50405 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC10.9□□□□□ -0.66
SftpbP50405 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SftpbP50405 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 CT025645.2-201ENSMUST00000223278 3827 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SftpbP50405 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SftpbP50405 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 AC144938.1-201ENSMUST00000223994 2167 ntBASIC10.89□□□□□ -0.67
SftpbP50405 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Gm37516-201ENSMUST00000192593 1954 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
SftpbP50405 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.89□□□□□ -0.67
SftpbP50405 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
SftpbP50405 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gm13611-201ENSMUST00000118269 318 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gm11952-201ENSMUST00000121172 821 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gm12566-201ENSMUST00000121479 359 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gm15881-201ENSMUST00000148792 942 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.89□□□□□ -0.67
SftpbP50405 Gm5244-201ENSMUST00000164001 339 ntBASIC10.89□□□□□ -0.67
SftpbP50405 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.89□□□□□ -0.67
SftpbP50405 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Gm37299-201ENSMUST00000193951 826 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gm6677-201ENSMUST00000195100 441 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gm7047-201ENSMUST00000196224 1063 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.89□□□□□ -0.67
SftpbP50405 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
SftpbP50405 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.89□□□□□ -0.67
SftpbP50405 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.89□□□□□ -0.67
SftpbP50405 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SftpbP50405 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
SftpbP50405 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.89□□□□□ -0.67
SftpbP50405 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SftpbP50405 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Rims2-204ENSMUST00000226410 3685 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpbP50405 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.89□□□□□ -0.67
SftpbP50405 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SftpbP50405 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.88□□□□□ -0.67
SftpbP50405 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SftpbP50405 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.88□□□□□ -0.67
SftpbP50405 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Gm11411-201ENSMUST00000117951 719 ntBASIC10.88□□□□□ -0.67
SftpbP50405 Gm13408-201ENSMUST00000119822 798 ntBASIC10.88□□□□□ -0.67
SftpbP50405 Gm13935-201ENSMUST00000121859 798 ntBASIC10.88□□□□□ -0.67
SftpbP50405 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpbP50405 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.88□□□□□ -0.67
SftpbP50405 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SftpbP50405 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms