Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.32□□□□□ -0.6
Usp11Q99K46 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Usp11Q99K46 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Usp11Q99K46 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Usp11Q99K46 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Usp11Q99K46 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Usp11Q99K46 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Usp11Q99K46 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Usp11Q99K46 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Usp11Q99K46 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Usp11Q99K46 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Usp11Q99K46 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Usp11Q99K46 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.32□□□□□ -0.6
Usp11Q99K46 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC11.32□□□□□ -0.6
Usp11Q99K46 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Usp11Q99K46 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Usp11Q99K46 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.31□□□□□ -0.6
Usp11Q99K46 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Usp11Q99K46 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Usp11Q99K46 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.31□□□□□ -0.6
Usp11Q99K46 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Usp11Q99K46 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Usp11Q99K46 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.31□□□□□ -0.6
Usp11Q99K46 Gm15197-201ENSMUST00000120526 478 ntBASIC11.31□□□□□ -0.6
Usp11Q99K46 Gm4917-201ENSMUST00000121452 650 ntBASIC11.31□□□□□ -0.6
Usp11Q99K46 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.31□□□□□ -0.6
Usp11Q99K46 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.31□□□□□ -0.6
Usp11Q99K46 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.31□□□□□ -0.6
Usp11Q99K46 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.31□□□□□ -0.6
Usp11Q99K46 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.31□□□□□ -0.6
Usp11Q99K46 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Gm43380-201ENSMUST00000200421 220 ntBASIC11.31□□□□□ -0.6
Usp11Q99K46 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.31□□□□□ -0.6
Usp11Q99K46 Gm45594-201ENSMUST00000211717 241 ntBASIC11.31□□□□□ -0.6
Usp11Q99K46 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.31□□□□□ -0.6
Usp11Q99K46 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.31□□□□□ -0.6
Usp11Q99K46 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Usp11Q99K46 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Usp11Q99K46 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11.31□□□□□ -0.6
Usp11Q99K46 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Usp11Q99K46 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Usp11Q99K46 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.3□□□□□ -0.6
Usp11Q99K46 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC11.3□□□□□ -0.6
Usp11Q99K46 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Usp11Q99K46 Gm13284-201ENSMUST00000121020 547 ntBASIC11.3□□□□□ -0.6
Usp11Q99K46 Mir1901-201ENSMUST00000122616 78 ntBASIC11.3□□□□□ -0.6
Usp11Q99K46 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.3□□□□□ -0.6
Usp11Q99K46 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.3□□□□□ -0.6
Usp11Q99K46 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.3□□□□□ -0.6
Usp11Q99K46 Gm9358-201ENSMUST00000183067 927 ntBASIC11.3□□□□□ -0.6
Usp11Q99K46 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.3□□□□□ -0.6
Usp11Q99K46 Gm42518-201ENSMUST00000196277 938 ntBASIC11.3□□□□□ -0.6
Usp11Q99K46 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Usp11Q99K46 Gm19009-201ENSMUST00000223072 823 ntBASIC11.3□□□□□ -0.6
Usp11Q99K46 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.3□□□□□ -0.6
Usp11Q99K46 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Usp11Q99K46 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Usp11Q99K46 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Usp11Q99K46 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms