Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3b2Q3UJB0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Gm11235-201ENSMUST00000117763 333 ntBASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Gm25735-201ENSMUST00000175164 215 ntBASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Gm9771-201ENSMUST00000198267 1137 ntBASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Gm43002-201ENSMUST00000200310 155 ntBASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Mir194-2-201ENSMUST00000083648 86 ntBASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b2Q3UJB0 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Gm28381-201ENSMUST00000188403 193 ntBASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Gm2328-201ENSMUST00000193525 535 ntBASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b2Q3UJB0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b2Q3UJB0 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms