Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hmgb1P63158 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hmgb1P63158 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hmgb1P63158 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm13408-201ENSMUST00000119822 798 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm12566-201ENSMUST00000121479 359 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm13935-201ENSMUST00000121859 798 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm44980-201ENSMUST00000205826 314 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Olfr721-ps1-202ENSMUST00000206688 1097 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm9132-201ENSMUST00000210182 832 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Id2-203ENSMUST00000222667 958 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.91□□□□□ -0.5
Hmgb1P63158 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hmgb1P63158 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hmgb1P63158 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm9271-201ENSMUST00000185988 2580 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.91□□□□□ -0.5
Hmgb1P63158 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC11.91□□□□□ -0.5
Hmgb1P63158 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hmgb1P63158 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmgb1P63158 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Gm4810-201ENSMUST00000177721 1607 ntBASIC11.9□□□□□ -0.5
Hmgb1P63158 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.9□□□□□ -0.5
Hmgb1P63158 Mir1893-201ENSMUST00000122565 83 ntBASIC11.9□□□□□ -0.5
Hmgb1P63158 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.9□□□□□ -0.5
Hmgb1P63158 Gm6485-201ENSMUST00000160676 439 ntBASIC11.9□□□□□ -0.5
Hmgb1P63158 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.9□□□□□ -0.5
Hmgb1P63158 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.9□□□□□ -0.5
Hmgb1P63158 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Gm45509-201ENSMUST00000209624 1229 ntBASIC11.9□□□□□ -0.5
Hmgb1P63158 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.9□□□□□ -0.5
Hmgb1P63158 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.9□□□□□ -0.5
Hmgb1P63158 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.9□□□□□ -0.5
Hmgb1P63158 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.9□□□□□ -0.5
Hmgb1P63158 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hmgb1P63158 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmgb1P63158 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms