Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm24078-201ENSMUST00000158184 103 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm42430-201ENSMUST00000197209 616 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm4294-201ENSMUST00000105169 614 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm15528-201ENSMUST00000117821 864 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Mir432-201ENSMUST00000157230 75 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm25830-201ENSMUST00000158923 132 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm26875-201ENSMUST00000181006 950 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Mir6953-201ENSMUST00000184745 68 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm6331-201ENSMUST00000217890 450 ntBASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usf3B2RUQ2 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Gm23769-201ENSMUST00000104441 121 ntBASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Snord17-201ENSMUST00000104526 238 ntBASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Gm12906-201ENSMUST00000154610 441 ntBASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.03□□□□□ -0.96
Usf3B2RUQ2 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.03□□□□□ -0.96
Usf3B2RUQ2 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Gm9791-201ENSMUST00000060997 447 ntBASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.03□□□□□ -0.96
Usf3B2RUQ2 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Gm11957-201ENSMUST00000118304 779 ntBASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usf3B2RUQ2 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms