Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
Pfdn5Q9WU28 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn5Q9WU28 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn5Q9WU28 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn5Q9WU28 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pfdn5Q9WU28 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfdn5Q9WU28 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn5Q9WU28 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn5Q9WU28 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn5Q9WU28 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pfdn5Q9WU28 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Pfdn5Q9WU28 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn5Q9WU28 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.31■□□□□ 0.2
Pfdn5Q9WU28 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.31■□□□□ 0.2
Pfdn5Q9WU28 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn5Q9WU28 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn5Q9WU28 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfdn5Q9WU28 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pfdn5Q9WU28 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn5Q9WU28 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn5Q9WU28 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn5Q9WU28 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn5Q9WU28 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn5Q9WU28 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn5Q9WU28 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn5Q9WU28 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn5Q9WU28 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn5Q9WU28 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfdn5Q9WU28 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pfdn5Q9WU28 Scarna2-201ENSMUST00000157560 414 ntBASIC16.29■□□□□ 0.2
Pfdn5Q9WU28 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pfdn5Q9WU28 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn5Q9WU28 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn5Q9WU28 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pfdn5Q9WU28 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn5Q9WU28 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.29■□□□□ 0.2
Pfdn5Q9WU28 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn5Q9WU28 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfdn5Q9WU28 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfdn5Q9WU28 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pfdn5Q9WU28 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pfdn5Q9WU28 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pfdn5Q9WU28 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pfdn5Q9WU28 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pfdn5Q9WU28 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pfdn5Q9WU28 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.27■□□□□ 0.2
Pfdn5Q9WU28 Gm16437-201ENSMUST00000025669 507 ntBASIC16.27■□□□□ 0.2
Pfdn5Q9WU28 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pfdn5Q9WU28 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pfdn5Q9WU28 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pfdn5Q9WU28 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pfdn5Q9WU28 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
Pfdn5Q9WU28 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Gm11687-201ENSMUST00000118911 886 ntBASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pfdn5Q9WU28 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Pfdn5Q9WU28 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pfdn5Q9WU28 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pfdn5Q9WU28 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pfdn5Q9WU28 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pfdn5Q9WU28 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pfdn5Q9WU28 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Pfdn5Q9WU28 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pfdn5Q9WU28 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pfdn5Q9WU28 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pfdn5Q9WU28 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pfdn5Q9WU28 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.24■□□□□ 0.19
Pfdn5Q9WU28 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pfdn5Q9WU28 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms