Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cthrc1Q9D1D6 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.64■□□□□ 0.57
Cthrc1Q9D1D6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.64■□□□□ 0.57
Cthrc1Q9D1D6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cthrc1Q9D1D6 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.64■□□□□ 0.57
Cthrc1Q9D1D6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cthrc1Q9D1D6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cthrc1Q9D1D6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cthrc1Q9D1D6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cthrc1Q9D1D6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cthrc1Q9D1D6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.63■□□□□ 0.57
Cthrc1Q9D1D6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cthrc1Q9D1D6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cthrc1Q9D1D6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.63■□□□□ 0.57
Cthrc1Q9D1D6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.63■□□□□ 0.57
Cthrc1Q9D1D6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cthrc1Q9D1D6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 Mir6236-201ENSMUST00000184437 123 ntBASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cthrc1Q9D1D6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cthrc1Q9D1D6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cthrc1Q9D1D6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cthrc1Q9D1D6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cthrc1Q9D1D6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cthrc1Q9D1D6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cthrc1Q9D1D6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cthrc1Q9D1D6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cthrc1Q9D1D6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cthrc1Q9D1D6 Gm45417-201ENSMUST00000209533 758 ntBASIC18.61■□□□□ 0.57
Cthrc1Q9D1D6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cthrc1Q9D1D6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cthrc1Q9D1D6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cthrc1Q9D1D6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cthrc1Q9D1D6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cthrc1Q9D1D6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cthrc1Q9D1D6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cthrc1Q9D1D6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cthrc1Q9D1D6 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.6■□□□□ 0.57
Cthrc1Q9D1D6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cthrc1Q9D1D6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cthrc1Q9D1D6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cthrc1Q9D1D6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cthrc1Q9D1D6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.58■□□□□ 0.57
Cthrc1Q9D1D6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cthrc1Q9D1D6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Cthrc1Q9D1D6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Cthrc1Q9D1D6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cthrc1Q9D1D6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Cthrc1Q9D1D6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cthrc1Q9D1D6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cthrc1Q9D1D6 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.58■□□□□ 0.56
Cthrc1Q9D1D6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cthrc1Q9D1D6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.58■□□□□ 0.56
Cthrc1Q9D1D6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cthrc1Q9D1D6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.58■□□□□ 0.56
Cthrc1Q9D1D6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cthrc1Q9D1D6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cthrc1Q9D1D6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cthrc1Q9D1D6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cthrc1Q9D1D6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cthrc1Q9D1D6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cthrc1Q9D1D6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cthrc1Q9D1D6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cthrc1Q9D1D6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cthrc1Q9D1D6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cthrc1Q9D1D6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cthrc1Q9D1D6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.56■□□□□ 0.56
Cthrc1Q9D1D6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cthrc1Q9D1D6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.56■□□□□ 0.56
Cthrc1Q9D1D6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cthrc1Q9D1D6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cthrc1Q9D1D6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cthrc1Q9D1D6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cthrc1Q9D1D6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cthrc1Q9D1D6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cthrc1Q9D1D6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cthrc1Q9D1D6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms