Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Golph3-205ENSMUST00000228671 2842 ntBASIC19.04■□□□□ 0.64
Upk1aQ9D132 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upk1aQ9D132 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.03■□□□□ 0.64
Upk1aQ9D132 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Upk1aQ9D132 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Upk1aQ9D132 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Upk1aQ9D132 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Upk1aQ9D132 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.02■□□□□ 0.64
Upk1aQ9D132 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Upk1aQ9D132 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Upk1aQ9D132 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Upk1aQ9D132 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Upk1aQ9D132 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Upk1aQ9D132 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Upk1aQ9D132 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upk1aQ9D132 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upk1aQ9D132 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Upk1aQ9D132 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upk1aQ9D132 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upk1aQ9D132 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Upk1aQ9D132 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upk1aQ9D132 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upk1aQ9D132 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19■□□□□ 0.63
Upk1aQ9D132 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upk1aQ9D132 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upk1aQ9D132 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19■□□□□ 0.63
Upk1aQ9D132 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upk1aQ9D132 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19■□□□□ 0.63
Upk1aQ9D132 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Upk1aQ9D132 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upk1aQ9D132 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19■□□□□ 0.63
Upk1aQ9D132 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Upk1aQ9D132 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19■□□□□ 0.63
Upk1aQ9D132 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Upk1aQ9D132 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Upk1aQ9D132 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19■□□□□ 0.63
Upk1aQ9D132 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upk1aQ9D132 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Upk1aQ9D132 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upk1aQ9D132 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upk1aQ9D132 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Upk1aQ9D132 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upk1aQ9D132 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Upk1aQ9D132 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upk1aQ9D132 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Upk1aQ9D132 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.99■□□□□ 0.63
Upk1aQ9D132 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Upk1aQ9D132 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upk1aQ9D132 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Upk1aQ9D132 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Upk1aQ9D132 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.98■□□□□ 0.63
Upk1aQ9D132 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.98■□□□□ 0.63
Upk1aQ9D132 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk1aQ9D132 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.98■□□□□ 0.63
Upk1aQ9D132 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upk1aQ9D132 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Upk1aQ9D132 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Upk1aQ9D132 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Upk1aQ9D132 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Upk1aQ9D132 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk1aQ9D132 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Upk1aQ9D132 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.97■□□□□ 0.63
Upk1aQ9D132 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk1aQ9D132 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.97■□□□□ 0.63
Upk1aQ9D132 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk1aQ9D132 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk1aQ9D132 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upk1aQ9D132 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.96■□□□□ 0.63
Upk1aQ9D132 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1aQ9D132 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1aQ9D132 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1aQ9D132 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1aQ9D132 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1aQ9D132 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms