Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Pcdhgc5Q91XW9 Gm26833-201ENSMUST00000180899 440 ntBASIC22.8■■□□□ 1.24
Pcdhgc5Q91XW9 Gm27405-201ENSMUST00000184201 112 ntBASIC22.8■■□□□ 1.24
Pcdhgc5Q91XW9 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.8■■□□□ 1.24
Pcdhgc5Q91XW9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.8■■□□□ 1.24
Pcdhgc5Q91XW9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.8■■□□□ 1.24
Pcdhgc5Q91XW9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgc5Q91XW9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgc5Q91XW9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgc5Q91XW9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgc5Q91XW9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgc5Q91XW9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.79■■□□□ 1.24
Pcdhgc5Q91XW9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgc5Q91XW9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgc5Q91XW9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgc5Q91XW9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgc5Q91XW9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgc5Q91XW9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgc5Q91XW9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgc5Q91XW9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgc5Q91XW9 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.78■■□□□ 1.24
Pcdhgc5Q91XW9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgc5Q91XW9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
Pcdhgc5Q91XW9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgc5Q91XW9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgc5Q91XW9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgc5Q91XW9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgc5Q91XW9 Gm10849-201ENSMUST00000100397 618 ntBASIC22.77■■□□□ 1.24
Pcdhgc5Q91XW9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.77■■□□□ 1.24
Pcdhgc5Q91XW9 Gm40848-201ENSMUST00000221998 324 ntBASIC22.77■■□□□ 1.24
Pcdhgc5Q91XW9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgc5Q91XW9 Gm10493-201ENSMUST00000097270 612 ntBASIC22.77■■□□□ 1.24
Pcdhgc5Q91XW9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgc5Q91XW9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgc5Q91XW9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgc5Q91XW9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgc5Q91XW9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
Pcdhgc5Q91XW9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgc5Q91XW9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgc5Q91XW9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Pcdhgc5Q91XW9 Gm43060-201ENSMUST00000200621 289 ntBASIC22.76■■□□□ 1.23
Pcdhgc5Q91XW9 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.76■■□□□ 1.23
Pcdhgc5Q91XW9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC22.76■■□□□ 1.23
Pcdhgc5Q91XW9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Pcdhgc5Q91XW9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgc5Q91XW9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc5Q91XW9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc5Q91XW9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc5Q91XW9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc5Q91XW9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.75■■□□□ 1.23
Pcdhgc5Q91XW9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Pcdhgc5Q91XW9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc5Q91XW9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc5Q91XW9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc5Q91XW9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgc5Q91XW9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
Pcdhgc5Q91XW9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhgc5Q91XW9 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.74■■□□□ 1.23
Pcdhgc5Q91XW9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.74■■□□□ 1.23
Pcdhgc5Q91XW9 Spcs1-204ENSMUST00000226782 949 ntBASIC22.74■■□□□ 1.23
Pcdhgc5Q91XW9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhgc5Q91XW9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhgc5Q91XW9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhgc5Q91XW9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhgc5Q91XW9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 Gm42642-201ENSMUST00000200683 355 ntBASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgc5Q91XW9 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.72■■□□□ 1.23
Pcdhgc5Q91XW9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc5Q91XW9 Gm37179-201ENSMUST00000194862 823 ntBASIC22.72■■□□□ 1.23
Pcdhgc5Q91XW9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc5Q91XW9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc5Q91XW9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc5Q91XW9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc5Q91XW9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgc5Q91XW9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 Gm27011-201ENSMUST00000182352 972 ntBASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgc5Q91XW9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Pcdhgc5Q91XW9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms