Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Swsap1Q8VCI7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Swsap1Q8VCI7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Swsap1Q8VCI7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Swsap1Q8VCI7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Swsap1Q8VCI7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.97■□□□□ 0.47
Swsap1Q8VCI7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Swsap1Q8VCI7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Swsap1Q8VCI7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Swsap1Q8VCI7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Swsap1Q8VCI7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Swsap1Q8VCI7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Swsap1Q8VCI7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.97■□□□□ 0.47
Swsap1Q8VCI7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Swsap1Q8VCI7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Swsap1Q8VCI7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Swsap1Q8VCI7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.96■□□□□ 0.47
Swsap1Q8VCI7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Swsap1Q8VCI7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Swsap1Q8VCI7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Swsap1Q8VCI7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Swsap1Q8VCI7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Swsap1Q8VCI7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
Swsap1Q8VCI7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Swsap1Q8VCI7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Swsap1Q8VCI7 Gm27454-201ENSMUST00000185090 204 ntBASIC17.95■□□□□ 0.46
Swsap1Q8VCI7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Swsap1Q8VCI7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Swsap1Q8VCI7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Swsap1Q8VCI7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Swsap1Q8VCI7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.93■□□□□ 0.46
Swsap1Q8VCI7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Swsap1Q8VCI7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Swsap1Q8VCI7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Swsap1Q8VCI7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Swsap1Q8VCI7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Swsap1Q8VCI7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Swsap1Q8VCI7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.93■□□□□ 0.46
Swsap1Q8VCI7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.93■□□□□ 0.46
Swsap1Q8VCI7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Swsap1Q8VCI7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Swsap1Q8VCI7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Swsap1Q8VCI7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Swsap1Q8VCI7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Swsap1Q8VCI7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Swsap1Q8VCI7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.91■□□□□ 0.46
Swsap1Q8VCI7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.91■□□□□ 0.46
Swsap1Q8VCI7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.91■□□□□ 0.46
Swsap1Q8VCI7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Swsap1Q8VCI7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Swsap1Q8VCI7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Swsap1Q8VCI7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Swsap1Q8VCI7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms