Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SIX5Q8N196 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SIX5Q8N196 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SIX5Q8N196 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23■■□□□ 1.27
SIX5Q8N196 ESRRAP2-201ENST00000418437 1549 ntBASIC23■■□□□ 1.27
SIX5Q8N196 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
SIX5Q8N196 CDCA4P2-201ENST00000441182 718 ntBASIC23■■□□□ 1.27
SIX5Q8N196 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23■■□□□ 1.27
SIX5Q8N196 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23■■□□□ 1.27
SIX5Q8N196 AC137761.2-201ENST00000561729 223 ntBASIC23■■□□□ 1.27
SIX5Q8N196 AC145350.3-201ENST00000569033 163 ntBASIC23■■□□□ 1.27
SIX5Q8N196 AC073111.5-205ENST00000641717 521 ntBASIC23■■□□□ 1.27
SIX5Q8N196 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SIX5Q8N196 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23■■□□□ 1.27
SIX5Q8N196 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23■■□□□ 1.27
SIX5Q8N196 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
SIX5Q8N196 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
SIX5Q8N196 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SIX5Q8N196 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SIX5Q8N196 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.99■■□□□ 1.27
SIX5Q8N196 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.99■■□□□ 1.27
SIX5Q8N196 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.99■■□□□ 1.27
SIX5Q8N196 AC010525.1-201ENST00000585559 441 ntBASIC22.99■■□□□ 1.27
SIX5Q8N196 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
SIX5Q8N196 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
SIX5Q8N196 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SIX5Q8N196 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SIX5Q8N196 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SIX5Q8N196 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.99■■□□□ 1.27
SIX5Q8N196 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SIX5Q8N196 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SIX5Q8N196 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
SIX5Q8N196 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
SIX5Q8N196 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
SIX5Q8N196 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.98■■□□□ 1.27
SIX5Q8N196 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SIX5Q8N196 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SIX5Q8N196 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.98■■□□□ 1.27
SIX5Q8N196 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.98■■□□□ 1.27
SIX5Q8N196 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SIX5Q8N196 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SIX5Q8N196 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SIX5Q8N196 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.97■■□□□ 1.27
SIX5Q8N196 AC091060.1-201ENST00000623524 1766 ntBASIC22.97■■□□□ 1.27
SIX5Q8N196 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SIX5Q8N196 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.97■■□□□ 1.27
SIX5Q8N196 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
SIX5Q8N196 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SIX5Q8N196 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.97■■□□□ 1.27
SIX5Q8N196 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SIX5Q8N196 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.97■■□□□ 1.27
SIX5Q8N196 AC104771.1-201ENST00000603335 964 ntBASIC22.97■■□□□ 1.27
SIX5Q8N196 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.97■■□□□ 1.27
SIX5Q8N196 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SIX5Q8N196 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SIX5Q8N196 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.97■■□□□ 1.27
SIX5Q8N196 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SIX5Q8N196 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SIX5Q8N196 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.97■■□□□ 1.27
SIX5Q8N196 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SIX5Q8N196 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SIX5Q8N196 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SIX5Q8N196 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.96■■□□□ 1.27
SIX5Q8N196 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.96■■□□□ 1.27
SIX5Q8N196 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.96■■□□□ 1.27
SIX5Q8N196 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.96■■□□□ 1.27
SIX5Q8N196 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SIX5Q8N196 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SIX5Q8N196 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
SIX5Q8N196 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SIX5Q8N196 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SIX5Q8N196 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SIX5Q8N196 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SIX5Q8N196 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SIX5Q8N196 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
SIX5Q8N196 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SIX5Q8N196 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SIX5Q8N196 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.95■■□□□ 1.26
SIX5Q8N196 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.95■■□□□ 1.26
SIX5Q8N196 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.95■■□□□ 1.26
SIX5Q8N196 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.95■■□□□ 1.26
SIX5Q8N196 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.95■■□□□ 1.26
SIX5Q8N196 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SIX5Q8N196 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.94■■□□□ 1.26
SIX5Q8N196 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SIX5Q8N196 AC026185.1-201ENST00000445748 174 ntBASIC22.94■■□□□ 1.26
SIX5Q8N196 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.94■■□□□ 1.26
SIX5Q8N196 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.94■■□□□ 1.26
SIX5Q8N196 KRT18P61-201ENST00000585825 1298 ntBASIC22.94■■□□□ 1.26
SIX5Q8N196 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.94■■□□□ 1.26
SIX5Q8N196 AC105233.4-201ENST00000642045 216 ntBASIC22.94■■□□□ 1.26
SIX5Q8N196 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SIX5Q8N196 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
SIX5Q8N196 AC092803.2-201ENST00000564287 1899 ntBASIC22.94■■□□□ 1.26
SIX5Q8N196 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.94■■□□□ 1.26
SIX5Q8N196 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIX5Q8N196 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIX5Q8N196 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.93■■□□□ 1.26
SIX5Q8N196 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
SIX5Q8N196 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms